Os05g0105500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0105500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.98 | 0.385 | 3.28 | 1.2 | 0.251 | -0.78 | -0.119 | 5.08 | -0.0663 | 3.7 | 29.29 | 1263 | -- | -- |
| 68.47 | 0.385 | 3.39 | 0.26 | 0.246 | -0.216 | -0.0896 | -- | -0.111 | 3.58 | 33.71 | 2122 | -- | -- |
| 66.97 | 0.381 | 3.28 | 1.21 | 0.254 | -0.769 | -- | 4.77 | -0.0445 | 3.82 | 28.79 | 1265 | -- | -- |
| 68.47 | 0.385 | 3.39 | 0.261 | 0.248 | -0.213 | -- | -- | -0.11 | 3.86 | 33.7 | 2122 | -- | -- |
| 69.31 | 0.388 | 3.28 | 1.13 | -- | -0.767 | -- | 4.75 | 0.0475 | -- | 27.93 | 1800 | -- | -- |
| 70.55 | 0.394 | 3.38 | 0.205 | 0.234 | -- | -0.128 | -- | -0.0762 | 4.17 | -- | -- | -- | -- |
| 70.59 | 0.393 | 3.38 | 0.207 | 0.233 | -- | -- | -- | -0.0755 | 4.18 | -- | -- | -- | -- |
| 71.71 | 0.394 | 3.38 | 0.196 | -- | -0.179 | -- | -- | -0.0544 | -- | 30.4 | 7571 | -- | -- |
| 70.16 | 0.39 | 3.39 | -- | 0.251 | -0.186 | -- | -- | -0.131 | 3.81 | 33.57 | 2117 | -- | -- |
| 73.54 | 0.401 | 3.38 | 0.216 | -- | -- | -- | -- | -0.0693 | -- | -- | -- | -- | -- |
| 71.72 | 0.396 | 3.38 | -- | 0.237 | -- | -- | -- | -0.0985 | 4.17 | -- | -- | -- | -- |
| 73.2 | 0.398 | 3.37 | -- | -- | -0.178 | -- | -- | -0.0507 | -- | 33 | 7540 | -- | -- |
| 74.77 | 0.404 | 3.38 | -- | -- | -- | -- | -- | -0.0933 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.85 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 2 | 64.95 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 65.12 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 5 | 65.15 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 9 | 65.26 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 10 | 65.29 | humidity | 50 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 11 | 65.31 | humidity | 60 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 14 | 65.38 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 16 | 65.40 | humidity | 60 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 17 | 65.40 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 20 | 65.41 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 21 | 65.41 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 22 | 65.41 | humidity | 60 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 32 | 65.42 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 63 | 65.50 | humidity | 50 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 272 | 65.70 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 294 | 65.75 | wind | 3 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 353 | 65.86 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 360 | 65.90 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 362 | 65.91 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 387 | 65.95 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 399 | 65.97 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 10 |
| 457 | 66.11 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 469 | 66.13 | humidity | 90 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 470 | 66.13 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 507 | 66.19 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 555 | 66.24 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 668 | 66.38 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 1 |
| 693 | 66.42 | humidity | 90 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 705 | 66.44 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 735 | 66.50 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 736 | 66.50 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 739 | 66.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 742 | 66.52 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 763 | 66.54 | humidity | 90 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 789 | 66.58 | wind | 7 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 799 | 66.60 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 813 | 66.62 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 827 | 66.63 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 854 | 66.66 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 859 | 66.66 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 894 | 66.69 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 910 | 66.70 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 948 | 66.72 | wind | 7 | 43200 | < th | dose dependent | sin | 23 | NA |
| 968 | 66.73 | wind | 1 | 43200 | > th | dose dependent | sin | 23 | NA |
| 977 | 66.73 | wind | 7 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 978 | 66.74 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |