Os05g0103800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0103800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.83 | 0.261 | 12.1 | -0.0604 | 0.32 | 0.681 | 0.704 | -0.0301 | 0.0303 | 21.4 | 8.523 | 211 | -- | -- |
| 30.83 | 0.259 | 12.1 | -0.0561 | 0.32 | 0.681 | 0.705 | -- | 0.0313 | 21.4 | 8.537 | 210 | -- | -- |
| 32.58 | 0.266 | 12.1 | -0.0927 | 0.311 | 0.66 | -- | -0.106 | 0.0295 | 21 | 10.93 | 236 | -- | -- |
| 32.59 | 0.266 | 12.1 | -0.0769 | 0.311 | 0.657 | -- | -- | 0.034 | 21 | 8.17 | 236 | -- | -- |
| 35.34 | 0.277 | 12.1 | -0.0378 | -- | 0.825 | -- | 0.565 | 0.024 | -- | 1.517 | 554 | -- | -- |
| 35.68 | 0.28 | 12.1 | 0.0807 | 0.412 | -- | 0.727 | -- | 0.125 | 19.8 | -- | -- | -- | -- |
| 37.08 | 0.285 | 12.1 | 0.0638 | 0.418 | -- | -- | -- | 0.127 | 19.4 | -- | -- | -- | -- |
| 34.41 | 0.273 | 12.1 | -0.106 | -- | 0.627 | -- | -- | 0.0267 | -- | 24.19 | 642 | -- | -- |
| 32.73 | 0.266 | 12.1 | -- | 0.315 | 0.62 | -- | -- | 0.0469 | 20.9 | 8.436 | 236 | -- | -- |
| 46.37 | 0.318 | 12 | 0.0569 | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
| 37.19 | 0.285 | 12.1 | -- | 0.417 | -- | -- | -- | 0.12 | 19.4 | -- | -- | -- | -- |
| 34.43 | 0.273 | 12.1 | -- | -- | 0.638 | -- | -- | 0.0696 | -- | 24.5 | 641 | -- | -- |
| 46.45 | 0.318 | 12 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 30 | 29.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 36 | 29.91 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 44 | 29.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 144 | 30.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 149 | 30.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 191 | 30.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 212 | 30.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 214 | 30.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 220 | 30.66 | temperature | 10 | 720 | > th | dose dependent | sin | 21 | NA |
| 255 | 30.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 257 | 30.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 259 | 30.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 272 | 30.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 298 | 30.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 302 | 30.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 364 | 30.90 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 388 | 30.92 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 398 | 30.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 400 | 30.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 413 | 30.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 437 | 30.96 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 484 | 31.02 | atmosphere | 995 | 43200 | > th | dose independent | sin | 22 | NA |
| 486 | 31.02 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 490 | 31.02 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 510 | 31.03 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 516 | 31.03 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 517 | 31.03 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 535 | 31.04 | atmosphere | 995 | 43200 | < th | dose independent | sin | 23 | NA |
| 559 | 31.05 | atmosphere | 995 | 43200 | < th | dose independent | sin | 21 | NA |
| 587 | 31.05 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 612 | 31.06 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 656 | 31.07 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 718 | 31.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 765 | 31.11 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 817 | 31.13 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |