Os05g0101600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0101600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.87 | 0.448 | 10.5 | 0.991 | 0.936 | -0.802 | 0.351 | 0.998 | -0.0934 | 23.4 | 20.01 | 283 | -- | -- |
| 93.31 | 0.45 | 10.5 | 0.884 | 0.964 | -0.999 | 0.33 | -- | -0.126 | 23.3 | 19.7 | 290 | -- | -- |
| 91.17 | 0.445 | 10.5 | 1.02 | 0.997 | -0.812 | -- | 1.09 | -0.0753 | 23.4 | 20.01 | 391 | -- | -- |
| 93.67 | 0.451 | 10.5 | 0.882 | 0.951 | -1.04 | -- | -- | -0.122 | 23.2 | 19.7 | 296 | -- | -- |
| 139.66 | 0.55 | 10.4 | 0.989 | -- | -0.948 | -- | 0.868 | -0.054 | -- | 20.3 | 144 | -- | -- |
| 119.88 | 0.513 | 10.5 | 0.542 | 0.998 | -- | 0.19 | -- | -0.29 | 23.8 | -- | -- | -- | -- |
| 120.04 | 0.513 | 10.5 | 0.534 | 0.998 | -- | -- | -- | -0.291 | 23.7 | -- | -- | -- | -- |
| 142.4 | 0.556 | 10.5 | 0.836 | -- | -1.01 | -- | -- | -0.103 | -- | 20.4 | 156 | -- | -- |
| 111.13 | 0.491 | 10.5 | -- | 0.948 | -0.697 | -- | -- | -0.247 | 23.4 | 20.15 | 265 | -- | -- |
| 182.63 | 0.631 | 10.5 | 0.563 | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
| 127.56 | 0.528 | 10.5 | -- | 1 | -- | -- | -- | -0.35 | 23.8 | -- | -- | -- | -- |
| 159.66 | 0.589 | 10.5 | -- | -- | -0.857 | -- | -- | -0.211 | -- | 20.3 | 115 | -- | -- |
| 191 | 0.645 | 10.5 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.55 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 2 | 75.60 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 6 | 75.77 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 9 | 75.83 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 11 | 75.86 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 18 | 75.94 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 46 | 76.59 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 49 | 76.68 | wind | 5 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 53 | 76.76 | wind | 5 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 59 | 76.89 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 82 | 77.28 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 102 | 77.45 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 129 | 77.83 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 134 | 77.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 136 | 77.93 | humidity | 90 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 148 | 77.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 169 | 78.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 173 | 78.17 | humidity | 90 | 14400 | > th | dose dependent | sin | 0 | NA |
| 181 | 78.22 | humidity | 90 | 14400 | > th | dose independent | sin | 17 | NA |
| 194 | 78.27 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 195 | 78.27 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 14 |
| 218 | 78.42 | humidity | 90 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 291 | 78.72 | humidity | 80 | 14400 | > th | dose dependent | sin | 20 | NA |
| 298 | 78.75 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 305 | 78.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 334 | 78.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 344 | 78.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 351 | 78.97 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 368 | 79.04 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 401 | 79.15 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 448 | 79.28 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 478 | 79.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 503 | 79.46 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 19 |
| 524 | 79.51 | humidity | 90 | 14400 | < th | dose independent | rect. | 8 | 17 |
| 542 | 79.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 545 | 79.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 572 | 79.63 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 600 | 79.74 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 603 | 79.76 | humidity | 90 | 14400 | < th | dose independent | sin | 19 | NA |
| 618 | 79.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 657 | 79.88 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 21 |
| 684 | 79.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 722 | 80.07 | wind | 3 | 43200 | > th | dose independent | sin | 8 | NA |
| 726 | 80.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 737 | 80.10 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 759 | 80.15 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 765 | 80.16 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 801 | 80.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 802 | 80.24 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 814 | 80.27 | wind | 3 | 43200 | < th | dose independent | sin | 8 | NA |
| 834 | 80.31 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 961 | 80.58 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 980 | 80.62 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 9 |