Os05g0101200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peroxisomal membrane anchor protein (Pex14p) domain containing protein.
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Os05g0101200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peroxisomal membrane anchor protein (Pex14p) domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.12 | 0.221 | 12.9 | -0.2 | 0.753 | 0.347 | -0.4 | -0.504 | 0.0286 | 1.26 | 24.6 | 11 | -- | -- |
| 22.45 | 0.222 | 13 | -0.275 | 0.745 | 0.39 | -0.57 | -- | 0.014 | 1.25 | 24.6 | 11 | -- | -- |
| 22.59 | 0.223 | 12.9 | -0.142 | 0.759 | 0.318 | -- | -0.822 | 0.0397 | 1.3 | 24.6 | 11 | -- | -- |
| 23.74 | 0.228 | 13 | -0.256 | 0.751 | 0.4 | -- | -- | 0.0112 | 1.32 | 24.1 | 13 | -- | -- |
| 44.2 | 0.311 | 12.9 | 0.0768 | -- | 1.27 | -- | -1.24 | 0.173 | -- | 52.17 | 6 | -- | -- |
| 24.7 | 0.233 | 13 | -0.366 | 0.818 | -- | -0.571 | -- | -0.0574 | 1.25 | -- | -- | -- | -- |
| 26.03 | 0.239 | 13 | -0.347 | 0.819 | -- | -- | -- | -0.0544 | 1.28 | -- | -- | -- | -- |
| 45.47 | 0.315 | 12.9 | -0.0923 | -- | 1.24 | -- | -- | 0.127 | -- | 69.37 | 7 | -- | -- |
| 25.31 | 0.234 | 12.9 | -- | 0.721 | 0.5 | -- | -- | 0.0486 | 1.29 | 24.14 | 14 | -- | -- |
| 67.4 | 0.384 | 13 | -0.315 | -- | -- | -- | -- | -0.0375 | -- | -- | -- | -- | -- |
| 29.2 | 0.253 | 13 | -- | 0.813 | -- | -- | -- | -0.0158 | 1.27 | -- | -- | -- | -- |
| 45.64 | 0.316 | 12.9 | -- | -- | 1.06 | -- | -- | 0.166 | -- | 30.14 | 7 | -- | -- |
| 70.02 | 0.391 | 12.9 | -- | -- | -- | -- | -- | -0.00256 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.27 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 11 | 4 |
| 2 | 20.31 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 4 | 20.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 5 | 20.37 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 7 | 20.44 | humidity | 80.0 | 270 | < th | dose independent | rect. | 11 | 4 |
| 14 | 20.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 19 | 20.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 22 |
| 20 | 20.58 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 11 | 7 |
| 29 | 20.66 | humidity | 80.0 | 90 | < th | dose independent | rect. | 11 | 7 |
| 34 | 20.70 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 19 |
| 42 | 20.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 52 | 20.77 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 55 | 20.78 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 6 | 18 |
| 58 | 20.81 | radiation | 1.0 | 90 | < th | dose independent | sin | 19 | NA |
| 59 | 20.81 | radiation | 1.0 | 30 | < th | dose independent | rect. | 6 | 19 |
| 64 | 20.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 65 | 20.82 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 70 | 20.83 | radiation | 1.0 | 30 | < th | dose dependent | sin | 18 | NA |
| 71 | 20.83 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 13 | 12 |
| 81 | 20.86 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 10 |
| 100 | 20.90 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 10 | 14 |
| 116 | 20.95 | radiation | 1.0 | 90 | > th | dose independent | sin | 19 | NA |
| 138 | 20.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 13 | 12 |
| 147 | 21.00 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 148 | 21.00 | radiation | 30.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 156 | 21.01 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 20 |
| 163 | 21.03 | radiation | 1.0 | 30 | < th | dose independent | rect. | 15 | 10 |
| 172 | 21.03 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 181 | 21.05 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 185 | 21.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 192 | 21.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 203 | 21.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 219 | 21.10 | radiation | 10.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 224 | 21.10 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 227 | 21.11 | radiation | 10.0 | 270 | > th | dose independent | rect. | 11 | 4 |
| 253 | 21.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 276 | 21.15 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 291 | 21.17 | humidity | 80.0 | 10 | < th | dose independent | rect. | 12 | 6 |
| 295 | 21.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 4 |
| 316 | 21.19 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 353 | 21.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 15 |
| 354 | 21.22 | radiation | 1.0 | 90 | > th | dose dependent | sin | 16 | NA |
| 356 | 21.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 367 | 21.23 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 381 | 21.25 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 405 | 21.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 430 | 21.29 | humidity | 80.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 432 | 21.29 | radiation | 30.0 | 90 | < th | dose independent | rect. | 6 | 18 |
| 446 | 21.30 | radiation | 40.0 | 90 | < th | dose independent | rect. | 18 | 19 |
| 449 | 21.30 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 4 |
| 450 | 21.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 471 | 21.32 | radiation | 30.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 489 | 21.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 511 | 21.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 525 | 21.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 528 | 21.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 532 | 21.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 545 | 21.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 559 | 21.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 560 | 21.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 561 | 21.39 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 593 | 21.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 611 | 21.41 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 10 |
| 619 | 21.41 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 623 | 21.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 656 | 21.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 668 | 21.44 | radiation | 1.0 | 270 | > th | dose independent | sin | 23 | NA |
| 672 | 21.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 7 |
| 674 | 21.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 685 | 21.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 9 |
| 686 | 21.45 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 687 | 21.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 696 | 21.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 708 | 21.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 728 | 21.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 4 |
| 734 | 21.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 16 |
| 736 | 21.47 | humidity | 70.0 | 30 | > th | dose independent | rect. | 6 | 19 |
| 746 | 21.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 771 | 21.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 813 | 21.50 | radiation | 1.0 | 270 | < th | dose dependent | sin | 23 | NA |
| 851 | 21.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 8 |
| 861 | 21.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 871 | 21.53 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 904 | 21.54 | temperature | 30.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 931 | 21.55 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 7 |
| 940 | 21.56 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 957 | 21.57 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 990 | 21.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 8 |