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Os04g0692600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0263) R2 : 0.892
β1 : -1.87 (0.0965) R2dD : 0.0925 R2D : 0.0587
β2 : 2.98 (0.087) R2dC : 0.46 R2C : 0.649
β3 : -1.4 (0.107) R2dE : 0.0698 R2E : 0.303
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.938 (0.0565) R2dN8 : 0.092 R2N8 : 0.0416
σ : 0.49
deviance : 110.89
__
_____
C
peak time of C : 7.49
E
wheather : radiation
threshold : 2.301e-07
memory length : 299
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 8.06
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.03 0.465 12.3 -1.99 3.16 -1.26 2.14 -0.529 -0.96 7.5 0.1711 278 7.61 --
98.3 0.462 12.3 -1.97 3.16 -1.25 2.28 -- -0.957 7.49 0.1753 279 7.66 --
106.51 0.481 12.3 -1.88 2.96 -1.32 -- -1.67 -0.941 7.45 0.001535 298 8.33 --
110.89 0.49 12.3 -1.87 2.98 -1.4 -- -- -0.938 7.49 2.301e-07 299 8.06 --
190.5 0.643 12.2 -1.36 -- -3.51 -- -0.964 -1.15 -- 0.69 548 10.5 --
131.22 0.537 12.3 -2.06 3.71 -- 2.6 -- -1.04 7.19 -- -- -- --
149.27 0.572 12.3 -2 3.72 -- -- -- -1.05 7.18 -- -- -- --
139.86 0.551 12.3 -1.39 -- -3.73 -- -- -0.77 -- 2.427e-06 539 12 --
202.86 0.663 12.3 -- 2.94 -1.5 -- -- -0.773 7.49 0.0001256 295 7.97 --
880.77 1.39 12.4 -1.93 -- -- -- -- -0.982 -- -- -- -- --
255.03 0.747 12.2 -- 3.7 -- -- -- -0.824 7.22 -- -- -- --
206.21 0.669 12.2 -- -- -3.88 -- -- -0.622 -- 0.03 540 12.3 --
979.5 1.46 12.3 -- -- -- -- -- -0.767 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.35 atmosphere 995.0 270 > th dose independent rect. 14 18
2 96.64 temperature 20.0 90 > th dose independent rect. 15 6
3 97.45 atmosphere 995.0 10 > th dose independent rect. 16 18
4 97.46 temperature 20.0 10 > th dose independent rect. 16 5
5 97.59 atmosphere 995.0 270 > th dose independent rect. 13 20
7 97.80 temperature 20.0 270 > th dose independent rect. 13 7
10 98.20 temperature 10.0 10 > th dose independent rect. 10 6
12 98.20 atmosphere 1015.0 10 < th dose independent rect. 10 6
13 98.20 precipitation 0.1 10 < th dose independent rect. 10 6
14 98.20 temperature 10.0 10 > th dose independent rect. 16 18
15 98.20 precipitation 0.1 10 < th dose dependent rect. 10 6
17 98.28 radiation 1.0 10 > th dose independent rect. 10 6
18 98.35 atmosphere 995.0 270 > th dose independent rect. 14 5
21 98.43 temperature 10.0 270 > th dose independent rect. 8 6
22 98.43 atmosphere 995.0 270 > th dose independent rect. 8 6
23 98.43 atmosphere 1015.0 270 < th dose independent rect. 8 6
24 98.43 temperature 10.0 270 > th dose independent rect. 14 18
25 98.44 temperature 10.0 90 > th dose dependent rect. 15 6
27 98.47 temperature 10.0 10 > th dose dependent rect. 16 5
29 98.53 precipitation 0.1 270 < th dose independent rect. 8 6
30 98.53 wind 9.0 270 < th dose independent rect. 14 18
31 98.53 wind 9.0 10 < th dose independent rect. 16 18
32 98.53 precipitation 0.1 270 < th dose dependent rect. 8 6
33 98.54 temperature 10.0 10 > th dose dependent rect. 16 18
35 98.72 temperature 25.0 270 > th dose independent rect. 16 1
36 98.77 temperature 10.0 1440 > th dose independent rect. 11 6
40 98.77 temperature 10.0 1440 > th dose independent rect. 17 18
50 98.94 radiation 1.0 270 > th dose independent rect. 8 6
56 99.06 wind 9.0 270 < th dose independent rect. 8 6
57 99.14 wind 9.0 10 < th dose independent rect. 10 6
61 99.25 radiation 40.0 270 < th dose independent rect. 14 18
66 99.43 temperature 10.0 270 > th dose independent rect. 9 4
67 99.43 atmosphere 995.0 270 > th dose independent rect. 9 4
68 99.43 atmosphere 1015.0 270 < th dose independent rect. 9 4
69 99.43 temperature 10.0 270 > th dose independent rect. 13 20
71 99.46 temperature 10.0 270 > th dose dependent rect. 13 8
72 99.47 precipitation 0.1 270 < th dose independent rect. 9 4
73 99.47 precipitation 0.1 270 < th dose dependent rect. 9 4
74 99.48 atmosphere 995.0 270 > th dose independent rect. 13 7
76 99.49 radiation 1.0 270 < th dose dependent sin 14 NA
78 99.53 radiation 30.0 90 < th dose independent rect. 15 6
79 99.53 wind 9.0 270 < th dose independent rect. 13 20
86 99.65 wind 1.0 270 > th dose independent rect. 9 4
92 99.72 radiation 1.0 270 > th dose independent rect. 9 4
93 99.72 atmosphere 995.0 10 > th dose independent rect. 16 5
94 99.72 wind 1.0 270 > th dose independent rect. 8 6
95 99.72 radiation 1.0 270 > th dose independent rect. 14 17
97 99.75 wind 1.0 10 > th dose independent rect. 10 6
101 99.88 atmosphere 995.0 270 > th dose independent rect. 15 2
102 99.89 atmosphere 995.0 90 > th dose dependent rect. 15 6
104 99.92 precipitation 0.1 10 < th dose independent rect. 16 5
105 99.92 precipitation 0.1 10 < th dose dependent rect. 16 5
108 99.98 atmosphere 995.0 10 > th dose independent rect. 10 6
109 99.99 temperature 10.0 270 > th dose dependent rect. 14 18
110 100.01 precipitation 0.1 270 < th dose independent rect. 19 19
111 100.01 precipitation 0.1 270 < th dose dependent rect. 19 19
115 100.05 wind 9.0 270 < th dose independent rect. 9 4
116 100.06 humidity 50.0 270 > th dose independent rect. 8 6
117 100.06 precipitation 0.1 90 < th dose independent rect. 21 18
118 100.06 precipitation 0.1 90 < th dose dependent rect. 21 18
120 100.11 temperature 10.0 90 > th dose independent rect. 15 6
122 100.11 atmosphere 1010.0 90 < th dose independent rect. 15 6
124 100.11 temperature 10.0 90 > th dose independent rect. 21 18
125 100.13 humidity 50.0 270 > th dose independent rect. 9 4
131 100.17 wind 9.0 90 < th dose independent rect. 15 6
135 100.21 wind 1.0 90 > th dose independent rect. 15 6
137 100.23 atmosphere 995.0 10 > th dose dependent rect. 16 5
150 100.41 precipitation 0.1 10 < th dose independent rect. 16 18
151 100.41 precipitation 0.1 10 < th dose dependent rect. 16 18
153 100.45 radiation 30.0 10 < th dose independent rect. 16 5
154 100.46 temperature 10.0 10 > th dose independent rect. 16 5
156 100.46 atmosphere 1010.0 10 < th dose independent rect. 16 5
160 100.46 temperature 10.0 10 > th dose independent rect. 21 19
167 100.51 temperature 10.0 270 > th dose independent rect. 19 19
168 100.51 atmosphere 995.0 270 > th dose independent rect. 19 19
171 100.56 radiation 1.0 270 > th dose independent sin 13 NA
175 100.60 radiation 1.0 270 < th dose independent sin 13 NA
183 100.61 wind 1.0 10 > th dose independent rect. 16 5
184 100.62 wind 9.0 10 < th dose independent rect. 16 5
185 100.63 temperature 10.0 1440 > th dose independent rect. 17 5
188 100.63 radiation 30.0 1440 < th dose independent rect. 17 5
194 100.63 temperature 10.0 1440 > th dose independent rect. 22 19
217 100.82 wind 9.0 90 < th dose independent rect. 21 18
218 100.82 precipitation 0.1 10 < th dose independent rect. 21 19
219 100.82 precipitation 0.1 10 < th dose dependent rect. 21 19
247 100.93 atmosphere 995.0 90 > th dose independent rect. 21 18
248 100.95 radiation 40.0 270 < th dose independent rect. 14 4
254 101.00 wind 9.0 270 < th dose independent rect. 19 19
259 101.06 humidity 90.0 270 < th dose independent rect. 15 2
262 101.08 precipitation 0.1 270 < th dose independent rect. 14 18
263 101.08 precipitation 0.1 270 < th dose dependent rect. 14 18
268 101.15 humidity 50.0 10 > th dose independent rect. 16 18
276 101.21 atmosphere 1015.0 10 < th dose independent rect. 16 18
277 101.21 atmosphere 995.0 270 > th dose dependent rect. 13 7
295 101.29 temperature 10.0 270 > th dose dependent rect. 13 20
301 101.36 wind 9.0 10 < th dose independent rect. 21 19
305 101.37 radiation 1.0 270 < th dose dependent rect. 18 10
306 101.38 radiation 40.0 270 < th dose independent rect. 15 2
312 101.39 wind 9.0 270 < th dose independent rect. 15 2
313 101.39 precipitation 0.1 270 < th dose independent rect. 14 5
314 101.39 precipitation 0.1 270 < th dose dependent rect. 14 5
319 101.41 temperature 10.0 270 > th dose dependent rect. 16 1
327 101.49 wind 1.0 270 > th dose independent rect. 15 2
328 101.49 radiation 40.0 10 < th dose independent rect. 16 18
340 101.56 temperature 10.0 270 > th dose independent rect. 15 2
342 101.56 atmosphere 1010.0 270 < th dose independent rect. 15 2
345 101.56 temperature 10.0 270 > th dose independent rect. 17 22
347 101.57 wind 9.0 270 < th dose independent rect. 13 7
353 101.60 atmosphere 995.0 270 > th dose independent rect. 3 15
358 101.64 atmosphere 995.0 270 > th dose dependent rect. 16 1
365 101.73 temperature 10.0 270 > th dose independent rect. 13 7
368 101.73 atmosphere 1015.0 270 < th dose independent rect. 13 7
374 101.77 humidity 50.0 10 > th dose independent rect. 10 6
391 101.85 radiation 1.0 270 > th dose independent rect. 11 1
403 101.92 temperature 10.0 270 > th dose independent rect. 11 1
404 101.92 atmosphere 995.0 270 > th dose independent rect. 11 1
405 101.92 atmosphere 1015.0 270 < th dose independent rect. 11 1
406 101.92 precipitation 0.1 270 < th dose independent rect. 11 1
408 101.92 humidity 50.0 270 > th dose independent rect. 19 19
409 101.92 temperature 10.0 270 > th dose independent rect. 12 23
410 101.92 precipitation 0.1 270 < th dose dependent rect. 11 1
421 101.99 wind 1.0 270 > th dose independent rect. 13 7
426 102.01 atmosphere 995.0 10 > th dose independent rect. 21 19
428 102.04 precipitation 0.1 270 < th dose independent rect. 18 10
430 102.04 precipitation 0.1 270 < th dose dependent rect. 18 10
441 102.10 radiation 40.0 10 < th dose dependent rect. 16 5
442 102.11 radiation 1.0 270 > th dose independent rect. 15 2
448 102.16 wind 1.0 270 > th dose independent rect. 11 1
462 102.21 humidity 90.0 270 < th dose independent rect. 14 4
465 102.24 humidity 60.0 270 > th dose independent rect. 18 10
469 102.26 radiation 1.0 270 < th dose independent rect. 18 10
472 102.27 wind 1.0 270 > th dose independent rect. 19 19
477 102.32 wind 9.0 270 < th dose independent rect. 3 15
478 102.32 humidity 50.0 270 > th dose independent rect. 20 17
491 102.43 wind 7.0 270 < th dose independent rect. 18 9
510 102.54 precipitation 0.1 270 < th dose independent rect. 13 20
512 102.54 precipitation 0.1 270 < th dose dependent rect. 13 20
536 102.63 temperature 15.0 270 > th dose independent rect. 3 15
548 102.69 wind 9.0 270 < th dose independent rect. 11 1
568 102.79 radiation 1.0 270 > th dose independent rect. 14 5
599 102.89 humidity 90.0 270 < th dose independent rect. 10 3
610 102.93 temperature 30.0 270 < th dose independent rect. 18 9
620 102.97 temperature 10.0 270 > th dose independent rect. 18 9
622 102.97 radiation 20.0 270 < th dose independent rect. 18 9
626 102.97 atmosphere 1015.0 270 < th dose independent rect. 3 15
642 103.03 radiation 40.0 10 < th dose dependent rect. 16 18
684 103.25 atmosphere 1015.0 90 < th dose independent rect. 21 18
689 103.27 wind 1.0 270 > th dose independent rect. 20 17
697 103.31 wind 1.0 270 > th dose dependent rect. 16 1
709 103.40 atmosphere 1015.0 270 < th dose independent rect. 14 18
738 103.55 atmosphere 1015.0 10 < th dose independent rect. 21 19
774 103.72 radiation 40.0 10 < th dose dependent rect. 14 7
786 103.77 humidity 50.0 10 > th dose independent rect. 16 5
807 103.83 atmosphere 995.0 270 > th dose independent rect. 18 9
852 104.05 atmosphere 1015.0 270 < th dose independent rect. 19 19
892 104.21 precipitation 0.1 270 < th dose independent rect. 4 14
893 104.21 precipitation 0.1 270 < th dose dependent rect. 4 14
894 104.22 humidity 90.0 270 < th dose independent rect. 11 1
915 104.27 precipitation 0.1 270 < th dose independent rect. 9 14
924 104.27 precipitation 0.1 270 < th dose dependent rect. 9 14
925 104.28 temperature 10.0 270 > th dose independent rect. 1 8
927 104.28 humidity 50.0 270 > th dose independent rect. 1 8
928 104.28 atmosphere 995.0 270 > th dose independent rect. 1 8
929 104.28 atmosphere 1015.0 270 < th dose independent rect. 1 8
930 104.28 temperature 10.0 270 > th dose independent rect. 9 16
937 104.30 temperature 10.0 270 > th dose independent rect. 23 10
938 104.30 humidity 50.0 270 > th dose independent rect. 23 10
939 104.30 atmosphere 995.0 270 > th dose independent rect. 23 10
940 104.30 temperature 10.0 270 > th dose independent rect. 9 14
942 104.31 wind 9.0 270 < th dose independent rect. 1 8
944 104.33 wind 9.0 270 < th dose independent rect. 23 10
971 104.50 humidity 90.0 10 < th dose independent rect. 10 6
991 104.57 precipitation 0.1 270 < th dose independent rect. 9 16
993 104.57 precipitation 0.1 270 < th dose dependent rect. 9 16