Os04g0691800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
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Os04g0691800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.15 | 0.491 | 11.1 | -0.16 | 0.929 | 0.911 | -0.137 | -0.0225 | 0.237 | 6.99 | 68.07 | 1261 | -- | -- |
| 109.15 | 0.487 | 11.1 | -0.158 | 0.929 | 0.909 | -0.137 | -- | 0.237 | 6.99 | 68.05 | 1261 | -- | -- |
| 109.2 | 0.487 | 11.1 | -0.162 | 0.929 | 0.91 | -- | -0.0175 | 0.237 | 6.98 | 68.11 | 1261 | -- | -- |
| 109.2 | 0.487 | 11.1 | -0.16 | 0.929 | 0.909 | -- | -- | 0.238 | 6.98 | 68.11 | 1261 | -- | -- |
| 153.52 | 0.577 | 11.1 | -0.15 | -- | 0.93 | -- | -0.00768 | 0.257 | -- | 68.9 | 1317 | -- | -- |
| 140.05 | 0.555 | 11.1 | 0.0325 | 0.963 | -- | -0.0422 | -- | 0.242 | 6.22 | -- | -- | -- | -- |
| 140.06 | 0.554 | 11.1 | 0.032 | 0.963 | -- | -- | -- | 0.243 | 6.22 | -- | -- | -- | -- |
| 153.52 | 0.577 | 11.1 | -0.149 | -- | 0.93 | -- | -- | 0.257 | -- | 68.9 | 1317 | -- | -- |
| 109.86 | 0.488 | 11.1 | -- | 0.929 | 0.889 | -- | -- | 0.255 | 6.96 | 68 | 1261 | -- | -- |
| 188.13 | 0.641 | 11.1 | 0.0584 | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
| 140.08 | 0.554 | 11.1 | -- | 0.963 | -- | -- | -- | 0.239 | 6.22 | -- | -- | -- | -- |
| 154.09 | 0.578 | 11.1 | -- | -- | 0.909 | -- | -- | 0.273 | -- | 68.31 | 1317 | -- | -- |
| 188.22 | 0.64 | 11.1 | -- | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.07 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 3 | 112.47 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 18 | 112.53 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 19 | 112.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 20 | 112.61 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 37 | 112.78 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 40 | 112.88 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 43 | 112.99 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 44 | 113.00 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 53 | 113.00 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 70 | 113.04 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 73 | 113.11 | humidity | 70.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 91 | 113.25 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 110 | 113.35 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 112 | 113.39 | radiation | 40.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 153 | 113.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 172 | 113.50 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 14 | 19 |
| 176 | 113.55 | radiation | 1.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 183 | 113.62 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 241 | 113.78 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 20 |
| 242 | 113.80 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 320 | 113.88 | radiation | 30.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 335 | 114.00 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 339 | 114.02 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 344 | 114.05 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 16 |
| 349 | 114.07 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 350 | 114.09 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 362 | 114.17 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 366 | 114.18 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 417 | 114.39 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 449 | 114.42 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 524 | 114.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 526 | 114.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 592 | 114.89 | radiation | 40.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 626 | 114.94 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 655 | 115.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 656 | 115.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 657 | 115.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 698 | 115.12 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 702 | 115.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 703 | 115.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 717 | 115.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 720 | 115.15 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 725 | 115.18 | radiation | 10.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 751 | 115.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 14 | 18 |
| 754 | 115.23 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 5 | 13 |
| 771 | 115.25 | radiation | 1.0 | 1440 | > th | dose dependent | no | NA | NA |
| 831 | 115.26 | radiation | 20.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 849 | 115.29 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 926 | 115.39 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 947 | 115.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 954 | 115.43 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 982 | 115.44 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 13 | 6 |