Os04g0687200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inorganic pyrophosphatase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0687200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Inorganic pyrophosphatase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143 | 0.562 | 5.21 | 0.699 | 2.15 | -0.173 | 0.633 | -3.2 | 0.301 | 22.5 | 50.42 | 1496 | -- | -- |
| 144.88 | 0.561 | 5.17 | 0.632 | 2.15 | -0.742 | 0.443 | -- | 0.377 | 22.6 | 84.67 | 4005 | -- | -- |
| 144.6 | 0.56 | 5.21 | 0.663 | 2.14 | -0.191 | -- | -2.89 | 0.298 | 22.5 | 50.94 | 1489 | -- | -- |
| 145.7 | 0.562 | 5.16 | 0.598 | 2.17 | -0.728 | -- | -- | 0.396 | 22.6 | 85 | 3995 | -- | -- |
| 418.19 | 0.952 | 5.21 | 0.408 | -- | 1.78 | -- | -6.53 | 0.255 | -- | 51.06 | 2949 | -- | -- |
| 152.16 | 0.578 | 5.18 | 0.603 | 2.12 | -- | 0.418 | -- | 0.32 | 22.5 | -- | -- | -- | -- |
| 152.88 | 0.579 | 5.18 | 0.586 | 2.12 | -- | -- | -- | 0.319 | 22.5 | -- | -- | -- | -- |
| 367.95 | 0.897 | 5.14 | 0.657 | -- | -1.5 | -- | -- | 0.266 | -- | 85 | 3995 | -- | -- |
| 154.01 | 0.578 | 5.16 | -- | 2.19 | -0.804 | -- | -- | 0.404 | 22.6 | 104.8 | 3980 | -- | -- |
| 428.05 | 0.967 | 5.13 | 0.624 | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
| 161.93 | 0.595 | 5.2 | -- | 2.12 | -- | -- | -- | 0.254 | 22.5 | -- | -- | -- | -- |
| 378.62 | 0.909 | 5.15 | -- | -- | -1.48 | -- | -- | 0.202 | -- | 86.04 | 4471 | -- | -- |
| 438.31 | 0.977 | 5.14 | -- | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.22 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 2 | 137.24 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 3 | 137.31 | humidity | 50 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 5 | 137.35 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 6 | 137.36 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 7 | 137.36 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 25 | 137.42 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 20 |
| 31 | 137.45 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 32 | 137.45 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 37 | 137.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 43 | 137.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 73 | 137.49 | humidity | 50 | 14400 | > th | dose independent | sin | 19 | NA |
| 129 | 137.57 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 133 | 137.58 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 167 | 137.62 | humidity | 50 | 14400 | < th | dose independent | sin | 19 | NA |
| 182 | 137.63 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 285 | 137.66 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 326 | 137.72 | humidity | 50 | 14400 | < th | dose independent | no | NA | NA |
| 468 | 137.74 | humidity | 60 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 553 | 137.89 | humidity | 60 | 14400 | < th | dose dependent | sin | 5 | NA |
| 565 | 137.96 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 581 | 137.97 | humidity | 50 | 14400 | < th | dose dependent | sin | 13 | NA |
| 584 | 137.98 | wind | 3 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 586 | 137.99 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 589 | 138.01 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 620 | 138.07 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 631 | 138.08 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 637 | 138.09 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 647 | 138.12 | wind | 3 | 14400 | < th | dose dependent | sin | 6 | NA |
| 664 | 138.17 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 677 | 138.20 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 710 | 138.24 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 725 | 138.28 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 740 | 138.31 | wind | 3 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 758 | 138.33 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 824 | 138.43 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 828 | 138.44 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 844 | 138.46 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 913 | 138.52 | humidity | 90 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 957 | 138.58 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 978 | 138.59 | humidity | 60 | 14400 | < th | dose dependent | no | NA | NA |