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Os04g0685700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0243) R2 : 0.698
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.88 (0.0579) R2dC : 0.699 R2C : 0.698
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00627 (0.0512) R2dN8 : 1.28e-05 R2N8 : -0.00134
σ : 0.459
deviance : 96.28
__
_____
C
peak time of C : 12.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.73 0.412 13.3 0.579 0.977 -0.83 0.377 0.601 0.0313 12.8 11.15 10 -- --
77.14 0.409 13.3 0.586 1 -0.802 -0.251 -- 0.0335 12.7 11.03 10 -- --
76.89 0.408 13.3 0.583 0.986 -0.836 -- 0.345 0.0386 12.7 11.54 10 -- --
77.41 0.41 13.3 0.579 1 -0.806 -- -- 0.0311 12.7 10.89 10 -- --
89.46 0.441 13.3 0.64 -- -1.51 -- 0.431 0.0236 -- 12.34 21 -- --
87.35 0.438 13.3 0.583 1.89 -- -0.237 -- 0.0588 12.3 -- -- -- --
87.6 0.438 13.3 0.574 1.89 -- -- -- 0.0577 12.3 -- -- -- --
89.56 0.441 13.3 0.571 -- -1.53 -- -- -0.0494 -- 11.42 21 -- --
86.15 0.432 13.3 -- 1 -0.802 -- -- -0.0305 12.6 11.74 10 -- --
311.88 0.825 13.3 0.512 -- -- -- -- 0.0283 -- -- -- -- --
96.28 0.459 13.3 -- 1.88 -- -- -- -0.00627 12.3 -- -- -- --
98.03 0.461 13.4 -- -- -1.53 -- -- -0.106 -- 12.01 19 -- --
318.78 0.833 13.3 -- -- -- -- -- -0.0284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.28 radiation 1.0 10 < th dose dependent rect. 3 18
2 74.29 radiation 1.0 10 < th dose dependent sin 1 NA
3 74.35 radiation 1.0 10 < th dose dependent rect. 24 22
14 74.89 radiation 1.0 10 < th dose independent rect. 24 22
19 75.02 radiation 1.0 10 < th dose independent rect. 3 19
23 75.11 atmosphere 1000.0 30 > th dose independent rect. 5 22
41 75.49 atmosphere 1000.0 270 > th dose independent rect. 19 5
49 75.67 wind 3.0 90 < th dose independent rect. 3 1
58 75.86 atmosphere 1000.0 270 > th dose independent rect. 20 3
66 75.98 radiation 1.0 10 > th dose independent sin 1 NA
69 76.00 wind 7.0 90 < th dose dependent rect. 3 1
70 76.00 radiation 20.0 10 < th dose dependent rect. 7 22
92 76.29 wind 9.0 720 < th dose independent rect. 7 21
95 76.33 radiation 1.0 10 < th dose independent sin 1 NA
96 76.33 precipitation 0.1 90 < th dose independent rect. 3 1
97 76.33 precipitation 0.1 90 < th dose dependent rect. 3 1
107 76.41 atmosphere 1015.0 720 < th dose dependent rect. 17 2
108 76.44 radiation 1.0 10 > th dose independent rect. 17 23
125 76.59 wind 9.0 720 < th dose independent rect. 13 15
131 76.64 wind 5.0 10 < th dose dependent rect. 3 2
133 76.67 atmosphere 995.0 270 > th dose dependent rect. 19 4
147 76.80 radiation 30.0 30 < th dose dependent rect. 13 16
153 76.86 radiation 10.0 10 < th dose dependent rect. 15 23
161 76.90 temperature 10.0 90 > th dose independent rect. 3 1
163 76.90 temperature 30.0 90 < th dose independent rect. 3 1
164 76.90 humidity 50.0 90 > th dose independent rect. 3 1
167 76.90 atmosphere 995.0 90 > th dose independent rect. 3 1
168 76.90 atmosphere 1010.0 90 < th dose independent rect. 3 1
170 76.90 radiation 1.0 90 < th dose independent rect. 3 1
175 76.90 temperature 10.0 90 > th dose independent rect. 4 23
176 76.90 radiation 1.0 90 < th dose dependent rect. 3 1
183 76.91 radiation 1.0 10 < th dose dependent rect. 3 14
184 76.92 wind 3.0 10 < th dose independent rect. 3 2
195 76.99 radiation 10.0 10 < th dose dependent no NA NA
196 76.99 radiation 10.0 10 < th dose dependent rect. 9 23
201 77.01 humidity 50.0 90 > th dose dependent rect. 3 1
204 77.04 radiation 10.0 10 < th dose dependent rect. 11 23
211 77.08 atmosphere 1000.0 10 > th dose independent rect. 21 5
212 77.09 wind 1.0 90 > th dose independent rect. 3 1
215 77.10 atmosphere 1000.0 270 > th dose independent rect. 10 14
234 77.22 wind 9.0 720 < th dose independent rect. 16 9
247 77.31 radiation 1.0 10 < th dose independent rect. 3 14
254 77.35 temperature 10.0 90 > th dose dependent rect. 3 1
264 77.39 atmosphere 1015.0 90 < th dose dependent rect. 3 1
270 77.44 precipitation 0.1 10 < th dose independent rect. 3 2
271 77.44 precipitation 0.1 10 < th dose dependent rect. 3 2
286 77.52 humidity 50.0 270 > th dose independent rect. 24 19
293 77.56 humidity 50.0 270 > th dose independent rect. 23 21
311 77.62 atmosphere 995.0 90 > th dose dependent rect. 21 5
318 77.64 wind 7.0 720 < th dose independent rect. 16 3
320 77.64 atmosphere 1015.0 90 < th dose dependent rect. 17 12
337 77.72 radiation 1.0 10 < th dose dependent rect. 3 11
342 77.73 atmosphere 1015.0 1440 < th dose independent rect. 3 2
343 77.73 humidity 50.0 90 > th dose independent rect. 2 19
347 77.74 humidity 70.0 10 > th dose dependent rect. 3 2
358 77.77 wind 9.0 720 < th dose independent rect. 6 14
364 77.79 wind 9.0 720 < th dose independent rect. 8 10
372 77.85 radiation 1.0 10 < th dose dependent rect. 3 2
375 77.86 wind 9.0 720 < th dose independent rect. 7 12
384 77.88 atmosphere 995.0 30 > th dose dependent rect. 5 22
388 77.90 temperature 30.0 90 < th dose dependent rect. 21 4
391 77.91 humidity 90.0 10 > th dose independent rect. 3 2
396 77.92 humidity 50.0 90 > th dose independent rect. 15 14
398 77.93 wind 9.0 1440 < th dose independent rect. 3 2
399 77.93 temperature 10.0 1440 > th dose independent rect. 3 2
402 77.93 temperature 30.0 1440 < th dose independent rect. 3 2
406 77.93 humidity 50.0 1440 > th dose independent rect. 3 2
415 77.93 atmosphere 995.0 1440 > th dose independent rect. 3 2
416 77.93 radiation 20.0 1440 < th dose independent rect. 3 2
429 77.93 atmosphere 1000.0 10 > th dose independent rect. 12 14
432 77.93 temperature 10.0 1440 > th dose independent rect. 5 22
440 77.95 wind 7.0 270 < th dose independent rect. 15 13
442 77.95 radiation 40.0 1440 < th dose dependent rect. 3 2
443 77.95 radiation 1.0 10 < th dose dependent rect. 3 9
447 77.96 atmosphere 1000.0 90 > th dose independent rect. 21 16
451 77.97 wind 9.0 90 < th dose independent rect. 4 23
454 77.97 radiation 1.0 10 < th dose dependent rect. 3 5
509 78.01 atmosphere 995.0 10 > th dose dependent rect. 21 5
533 78.04 radiation 1.0 10 < th dose independent rect. 3 11
535 78.04 radiation 10.0 10 < th dose independent rect. 14 15
537 78.04 temperature 30.0 90 < th dose dependent rect. 3 1
545 78.05 radiation 10.0 10 < th dose independent rect. 8 21
576 78.11 atmosphere 1000.0 10 > th dose independent rect. 10 16
594 78.15 temperature 30.0 270 < th dose dependent rect. 19 4
603 78.17 precipitation 0.1 10 < th dose independent rect. 5 22
606 78.17 precipitation 0.1 10 < th dose dependent rect. 5 22
613 78.20 atmosphere 1015.0 270 < th dose independent rect. 23 11
615 78.20 wind 7.0 720 < th dose independent rect. 16 20
621 78.22 temperature 10.0 720 > th dose dependent rect. 16 3
634 78.24 wind 9.0 720 < th dose independent rect. 24 19
638 78.26 radiation 1.0 10 < th dose independent rect. 3 9
641 78.26 precipitation 0.1 90 < th dose independent rect. 4 23
646 78.26 precipitation 0.1 90 < th dose dependent rect. 4 23
648 78.27 atmosphere 995.0 90 > th dose dependent rect. 3 1
649 78.27 wind 1.0 270 > th dose dependent rect. 21 2
658 78.28 radiation 1.0 10 < th dose independent rect. 3 5
677 78.32 humidity 50.0 10 > th dose independent rect. 16 13
685 78.33 temperature 15.0 270 > th dose independent rect. 23 21
690 78.34 wind 9.0 270 < th dose independent rect. 23 21
709 78.38 temperature 30.0 90 < th dose dependent rect. 19 6
720 78.40 radiation 20.0 30 < th dose independent rect. 12 17
722 78.40 atmosphere 1015.0 270 < th dose independent rect. 23 22
742 78.44 wind 9.0 10 < th dose independent rect. 5 22
752 78.46 atmosphere 1015.0 720 < th dose independent rect. 16 12
762 78.48 temperature 15.0 270 > th dose independent rect. 24 11
763 78.48 atmosphere 1015.0 720 < th dose independent rect. 7 21
764 78.48 humidity 50.0 10 > th dose independent rect. 24 22
767 78.49 radiation 40.0 270 < th dose independent rect. 14 14
798 78.53 humidity 50.0 270 > th dose dependent rect. 20 3
804 78.55 radiation 20.0 90 < th dose independent rect. 15 14
872 78.60 temperature 30.0 10 < th dose independent rect. 2 19
883 78.63 wind 7.0 270 < th dose independent rect. 23 11
913 78.65 atmosphere 995.0 720 > th dose independent rect. 19 21
919 78.66 precipitation 0.1 270 < th dose independent rect. 23 21
923 78.66 precipitation 0.1 270 < th dose dependent rect. 23 21
934 78.67 atmosphere 1010.0 720 < th dose independent rect. 16 3
977 78.73 precipitation 0.1 270 < th dose independent rect. 15 13
980 78.73 precipitation 0.1 270 < th dose dependent rect. 15 13
982 78.74 atmosphere 1015.0 720 < th dose independent rect. 23 5
986 78.74 humidity 50.0 270 > th dose dependent rect. 19 5
997 78.75 radiation 20.0 10 < th dose independent rect. 24 22