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Os04g0683800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphoribosyltransferase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.53 (0.0326) R2 : 0.733
β1 : -1.14 (0.119) R2dD : 0.0551 R2D : 0.0304
β2 : 2.69 (0.081) R2dC : 0.649 R2C : 0.625
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.673 (0.0696) R2dN8 : 0.0735 R2N8 : 0.0283
σ : 0.613
deviance : 171.25
__
_____
C
peak time of C : 8.92
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.03 0.575 6.35 0.201 2.62 -0.709 1.04 4.33 -0.231 8.87 25.24 3711 -- --
156.86 0.583 6.47 -0.329 2.7 -1.01 0.726 -- -0.418 8.85 18.8 12996 -- --
153.63 0.577 6.36 0.162 2.61 -0.716 -- 4.1 -0.237 8.86 25.3 3709 -- --
158.42 0.586 6.47 -0.325 2.69 -0.989 -- -- -0.41 8.9 18.8 13014 -- --
532.85 1.08 6.29 0.857 -- -1.3 -- 6.01 0.0541 -- 25.1 3603 -- --
169.23 0.61 6.53 -1.16 2.69 -- 0.769 -- -0.673 8.93 -- -- -- --
171.25 0.613 6.53 -1.14 2.69 -- -- -- -0.673 8.92 -- -- -- --
566.54 1.11 6.55 -0.433 -- -1.01 -- -- -0.401 -- 19.5 9451 -- --
159.9 0.589 6.45 -- 2.73 -1.19 -- -- -0.347 8.91 18.6 15873 -- --
584.01 1.13 6.6 -1.14 -- -- -- -- -0.654 -- -- -- -- --
205.25 0.67 6.5 -- 2.68 -- -- -- -0.546 8.95 -- -- -- --
569.21 1.11 6.53 -- -- -1.21 -- -- -0.301 -- 17.4 26779 -- --
618.09 1.16 6.57 -- -- -- -- -- -0.528 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 135.47 temperature 10.0 270 > th dose dependent rect. 22 5
2 136.76 temperature 15.0 270 > th dose independent rect. 22 5
3 136.99 atmosphere 995.0 270 > th dose dependent rect. 23 4
5 137.34 wind 7.0 270 < th dose independent rect. 22 5
7 137.77 temperature 10.0 270 > th dose dependent rect. 23 3
10 137.86 temperature 30.0 270 < th dose independent rect. 22 5
11 137.86 humidity 50.0 270 > th dose independent rect. 22 5
14 137.86 atmosphere 995.0 270 > th dose independent rect. 22 5
15 137.86 radiation 1.0 270 < th dose independent rect. 22 5
20 137.86 temperature 10.0 270 > th dose independent rect. 3 19
21 137.86 radiation 1.0 270 < th dose dependent rect. 22 5
26 137.91 precipitation 0.1 270 < th dose independent rect. 22 5
27 137.91 precipitation 0.1 270 < th dose dependent rect. 22 5
30 138.14 atmosphere 1010.0 270 < th dose independent rect. 22 5
32 138.21 temperature 10.0 270 > th dose dependent rect. 8 19
39 138.77 atmosphere 1005.0 270 > th dose dependent rect. 24 2
40 138.92 wind 9.0 270 < th dose independent rect. 3 19
41 138.93 temperature 10.0 10 > th dose dependent rect. 10 19
42 139.07 humidity 50.0 270 > th dose dependent rect. 3 8
52 139.70 temperature 15.0 270 > th dose independent rect. 21 7
84 140.21 atmosphere 1000.0 10 > th dose dependent rect. 24 5
85 140.24 wind 9.0 270 < th dose dependent rect. 22 5
89 140.38 wind 7.0 270 < th dose independent rect. 21 7
93 140.45 precipitation 0.1 270 < th dose independent rect. 3 19
94 140.45 precipitation 0.1 270 < th dose dependent rect. 3 19
119 140.72 wind 1.0 270 > th dose independent rect. 23 3
123 140.79 temperature 10.0 270 > th dose dependent rect. 22 17
124 140.80 atmosphere 1015.0 270 < th dose independent rect. 3 19
126 140.85 humidity 90.0 270 < th dose independent rect. 23 17
129 140.91 wind 1.0 270 > th dose independent rect. 22 5
131 140.94 temperature 20.0 270 > th dose independent rect. 8 9
134 140.99 temperature 30.0 270 < th dose independent rect. 21 7
135 140.99 humidity 50.0 270 > th dose independent rect. 21 7
138 140.99 atmosphere 995.0 270 > th dose independent rect. 21 7
139 140.99 radiation 1.0 270 < th dose independent rect. 21 7
144 140.99 temperature 10.0 270 > th dose independent rect. 4 17
145 140.99 radiation 1.0 270 < th dose dependent rect. 21 7
151 141.17 temperature 15.0 270 > th dose independent rect. 10 17
155 141.21 temperature 15.0 270 > th dose independent rect. 22 17
161 141.34 radiation 1.0 90 < th dose dependent rect. 23 7
166 141.44 radiation 1.0 90 < th dose independent rect. 23 7
168 141.46 precipitation 0.1 270 < th dose independent rect. 21 7
169 141.46 precipitation 0.1 270 < th dose dependent rect. 21 7
187 141.49 radiation 1.0 90 < th dose dependent rect. 23 16
192 141.53 precipitation 0.1 270 < th dose independent rect. 10 17
194 141.53 precipitation 0.1 270 < th dose dependent rect. 10 17
208 141.80 humidity 50.0 270 > th dose dependent rect. 17 16
210 141.83 atmosphere 995.0 270 > th dose independent rect. 3 19
216 141.92 radiation 1.0 90 < th dose dependent rect. 23 11
218 141.97 wind 9.0 270 < th dose independent rect. 4 17
231 142.13 atmosphere 1015.0 270 < th dose independent rect. 4 17
259 142.38 wind 9.0 270 < th dose independent rect. 10 17
262 142.44 radiation 1.0 90 < th dose independent rect. 23 17
269 142.49 radiation 1.0 10 < th dose dependent rect. 24 16
276 142.54 radiation 1.0 10 < th dose dependent sin 5 NA
278 142.55 humidity 60.0 270 > th dose independent rect. 3 7
283 142.60 temperature 10.0 10 > th dose dependent rect. 24 5
293 142.77 temperature 10.0 270 > th dose independent rect. 3 7
294 142.77 atmosphere 995.0 270 > th dose independent rect. 3 7
295 142.77 atmosphere 1015.0 270 < th dose independent rect. 3 7
307 142.85 radiation 1.0 10 < th dose dependent rect. 24 14
310 142.86 wind 9.0 270 < th dose independent rect. 3 7
311 142.86 radiation 10.0 30 < th dose dependent sin 8 NA
315 142.90 precipitation 0.1 270 < th dose independent rect. 3 7
316 142.90 precipitation 0.1 270 < th dose dependent rect. 3 7
330 142.93 radiation 1.0 90 < th dose independent rect. 23 11
332 142.94 radiation 1.0 10 > th dose independent sin 6 NA
353 143.10 radiation 1.0 10 < th dose dependent rect. 24 7
354 143.12 radiation 1.0 10 < th dose dependent rect. 24 12
366 143.25 atmosphere 995.0 270 > th dose independent rect. 23 16
375 143.36 wind 9.0 270 < th dose independent rect. 23 16
378 143.42 radiation 1.0 10 < th dose independent rect. 24 7
385 143.50 atmosphere 1015.0 270 < th dose independent rect. 23 16
386 143.52 precipitation 0.1 270 < th dose independent rect. 7 10
387 143.52 precipitation 0.1 270 < th dose dependent rect. 7 10
389 143.55 wind 5.0 10 < th dose independent rect. 24 5
391 143.57 temperature 10.0 270 > th dose independent rect. 15 8
395 143.61 atmosphere 1010.0 270 < th dose independent rect. 9 18
397 143.63 temperature 30.0 270 < th dose independent rect. 3 7
398 143.64 humidity 50.0 270 > th dose independent rect. 17 14
400 143.66 precipitation 0.1 270 < th dose independent rect. 4 17
401 143.66 precipitation 0.1 270 < th dose dependent rect. 4 17
402 143.67 precipitation 0.1 270 < th dose independent rect. 23 16
403 143.67 precipitation 0.1 270 < th dose dependent rect. 23 16
414 143.70 temperature 15.0 10 > th dose independent rect. 24 5
416 143.72 atmosphere 1010.0 10 < th dose independent rect. 24 5
429 143.80 radiation 1.0 10 < th dose independent rect. 24 16
437 143.83 temperature 30.0 10 < th dose independent rect. 24 5
438 143.83 humidity 50.0 10 > th dose independent rect. 24 5
441 143.83 atmosphere 995.0 10 > th dose independent rect. 24 5
447 143.83 temperature 10.0 10 > th dose independent rect. 5 19
458 143.89 wind 9.0 270 < th dose independent rect. 7 10
463 143.93 atmosphere 1015.0 270 < th dose independent rect. 7 10
464 143.93 temperature 10.0 270 > th dose independent rect. 17 14
465 143.93 radiation 30.0 270 < th dose independent rect. 17 14
467 143.93 radiation 1.0 10 < th dose independent rect. 24 14
469 143.93 wind 9.0 10 < th dose dependent rect. 24 5
482 144.02 humidity 90.0 270 < th dose independent rect. 23 4
483 144.03 radiation 1.0 90 > th dose independent sin 8 NA
493 144.18 radiation 40.0 270 < th dose independent rect. 15 8
498 144.20 radiation 1.0 10 < th dose independent rect. 24 12
506 144.24 radiation 1.0 10 < th dose independent sin 6 NA
530 144.34 wind 9.0 270 < th dose independent rect. 15 8
535 144.37 wind 9.0 270 < th dose independent rect. 17 14
539 144.43 wind 1.0 270 > th dose independent rect. 10 17
551 144.49 precipitation 0.1 10 < th dose independent rect. 5 19
552 144.49 precipitation 0.1 10 < th dose dependent rect. 5 19
565 144.58 radiation 1.0 90 < th dose independent sin 8 NA
567 144.58 radiation 40.0 270 < th dose independent rect. 3 7
568 144.58 atmosphere 1010.0 10 < th dose independent rect. 10 19
574 144.62 atmosphere 995.0 270 > th dose independent rect. 17 14
578 144.64 temperature 10.0 270 > th dose dependent rect. 8 8
603 144.77 atmosphere 995.0 270 > th dose independent rect. 10 17
609 144.81 temperature 25.0 270 > th dose independent rect. 22 17
616 144.85 precipitation 0.1 10 < th dose independent rect. 24 5
617 144.85 precipitation 0.1 10 < th dose dependent rect. 24 5
641 145.00 radiation 40.0 270 < th dose dependent rect. 17 15
646 145.02 wind 9.0 10 < th dose independent rect. 5 19
684 145.10 humidity 50.0 270 > th dose dependent rect. 22 5
723 145.30 humidity 50.0 270 > th dose independent rect. 22 17
735 145.40 radiation 1.0 270 < th dose independent rect. 3 19
749 145.47 temperature 25.0 270 > th dose independent rect. 23 4
751 145.49 wind 1.0 270 > th dose independent rect. 8 9
756 145.54 temperature 15.0 270 > th dose independent rect. 7 21
805 145.80 radiation 1.0 270 < th dose independent rect. 4 17
823 145.89 humidity 50.0 10 > th dose independent rect. 5 19
849 145.97 humidity 50.0 270 > th dose independent rect. 3 19
869 146.10 radiation 1.0 270 < th dose dependent rect. 4 17
872 146.11 humidity 50.0 10 > th dose dependent rect. 24 5
876 146.12 atmosphere 995.0 10 > th dose independent rect. 5 19
878 146.13 atmosphere 995.0 270 > th dose independent rect. 8 9
885 146.17 atmosphere 995.0 270 > th dose independent rect. 15 7
886 146.17 precipitation 0.1 270 < th dose independent rect. 15 7
888 146.17 precipitation 0.1 270 < th dose dependent rect. 15 7
897 146.22 radiation 1.0 270 < th dose dependent rect. 3 19
900 146.23 humidity 50.0 270 > th dose dependent rect. 23 3
925 146.29 wind 1.0 270 > th dose independent rect. 15 7
961 146.45 atmosphere 1015.0 10 < th dose independent rect. 5 19