Os04g0679000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sorbitol transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0679000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Sorbitol transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.69 | 0.607 | 8.19 | 1.54 | 0.954 | 2.3 | 0.999 | -1.32 | -0.175 | 7.34 | 24.6 | 2939 | -- | -- |
| 168.82 | 0.605 | 8.25 | 1.22 | 0.946 | 2.32 | 1.13 | -- | -0.276 | 7.13 | 24.6 | 2938 | -- | -- |
| 169.38 | 0.606 | 8.19 | 1.56 | 0.952 | 2.29 | -- | -1.34 | -0.178 | 7.41 | 24.6 | 2938 | -- | -- |
| 171.06 | 0.609 | 8.24 | 1.17 | 0.962 | 2.22 | -- | -- | -0.295 | 7.41 | 24.6 | 2938 | -- | -- |
| 200.55 | 0.66 | 8.23 | 1.44 | -- | 2.37 | -- | -0.725 | -0.195 | -- | 24.5 | 3478 | -- | -- |
| 296.34 | 0.807 | 8.39 | 0.318 | 0.873 | -- | 0.773 | -- | -0.964 | 8.07 | -- | -- | -- | -- |
| 298.11 | 0.809 | 8.39 | 0.341 | 0.871 | -- | -- | -- | -0.964 | 8.17 | -- | -- | -- | -- |
| 201.17 | 0.661 | 8.22 | 1.54 | -- | 2.24 | -- | -- | -0.147 | -- | 21.8 | 3535 | -- | -- |
| 202.24 | 0.662 | 8.28 | -- | 0.971 | 1.8 | -- | -- | -0.505 | 7.16 | 24.5 | 2773 | -- | -- |
| 339.86 | 0.861 | 8.42 | 0.348 | -- | -- | -- | -- | -0.953 | -- | -- | -- | -- | -- |
| 301.17 | 0.812 | 8.4 | -- | 0.873 | -- | -- | -- | -1 | 8.14 | -- | -- | -- | -- |
| 219.43 | 0.69 | 8.3 | -- | -- | 1.69 | -- | -- | -0.437 | -- | 22.57 | 2082 | -- | -- |
| 343.05 | 0.865 | 8.42 | -- | -- | -- | -- | -- | -0.992 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 13 | 158.56 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 15 | 158.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 32 | 159.46 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 34 | 159.51 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 81 | 160.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 97 | 160.66 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 268 | 162.87 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 279 | 162.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 477 | 164.01 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 561 | 164.37 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |