Os04g0678900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sugar transporter family protein.
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Os04g0678900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sugar transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.37 | 0.68 | 7.41 | 0.919 | 0.532 | 1.56 | 0.526 | -0.241 | -0.115 | 8.76 | 22.4 | 1257 | -- | -- |
| 209.51 | 0.674 | 7.42 | 0.838 | 0.536 | 1.56 | 0.507 | -- | -0.135 | 8.77 | 22.43 | 1264 | -- | -- |
| 210.29 | 0.675 | 7.41 | 0.918 | 0.536 | 1.56 | -- | -0.225 | -0.119 | 8.84 | 22.4 | 1261 | -- | -- |
| 209.87 | 0.675 | 7.42 | 0.867 | 0.46 | 1.59 | -- | -- | -0.147 | 8.5 | 22.28 | 1124 | -- | -- |
| 217.01 | 0.686 | 7.43 | 0.871 | -- | 1.6 | -- | -0.0825 | -0.14 | -- | 22.3 | 912 | -- | -- |
| 310.26 | 0.826 | 7.54 | 0.299 | 0.608 | -- | 0.407 | -- | -0.685 | 9.67 | -- | -- | -- | -- |
| 310.88 | 0.826 | 7.54 | 0.314 | 0.605 | -- | -- | -- | -0.684 | 9.72 | -- | -- | -- | -- |
| 216.85 | 0.686 | 7.44 | 0.831 | -- | 1.58 | -- | -- | -0.149 | -- | 22.26 | 856 | -- | -- |
| 226.73 | 0.701 | 7.46 | -- | 0.409 | 1.37 | -- | -- | -0.289 | 8.56 | 22.38 | 978 | -- | -- |
| 332.66 | 0.852 | 7.56 | 0.309 | -- | -- | -- | -- | -0.683 | -- | -- | -- | -- | -- |
| 313.49 | 0.828 | 7.55 | -- | 0.604 | -- | -- | -- | -0.719 | 9.69 | -- | -- | -- | -- |
| 234 | 0.712 | 7.47 | -- | -- | 1.44 | -- | -- | -0.285 | -- | 22.26 | 855 | -- | -- |
| 335.18 | 0.855 | 7.56 | -- | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 8 | 217.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 22 | 217.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 35 | 218.32 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 36 | 218.33 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 52 | 218.74 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 61 | 218.92 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 67 | 219.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 69 | 219.08 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 77 | 219.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 79 | 219.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 80 | 219.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 81 | 219.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 83 | 219.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 87 | 219.39 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 116 | 219.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 120 | 219.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 128 | 219.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 166 | 220.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 186 | 220.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 197 | 220.47 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 208 | 220.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 228 | 220.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 230 | 220.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 233 | 220.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 300 | 221.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 355 | 221.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 376 | 221.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 502 | 222.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 678 | 223.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 741 | 224.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 943 | 225.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 974 | 225.75 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |