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Os04g0676400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.36 (0.0384) R2 : 0.363
β1 : -1.95 (0.142) R2dD : 0.302 R2D : 0.207
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.37 (0.139) R2dE : 0.14 R2E : 0.0532
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.357 (0.0838) R2dN8 : 0.0419 R2N8 : -0.0272
σ : 0.715
deviance : 235.36
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 17.06
memory length : 44
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.3
open length of G : 19.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
212.32 0.685 7.34 -1.81 1.07 1.65 2.33 2.13 -0.307 14.9 7.938 112 18.2 17
216.29 0.685 7.36 -1.95 1.02 1.62 1.41 -- -0.357 14.8 7.32 77 18.2 17.2
225.71 0.7 7.35 -1.86 0.926 1.69 -- 1.39 -0.366 15 11.11 89 18.1 17.4
222.52 0.695 7.36 -1.94 1.06 1.65 -- -- -0.332 15.2 6.06 75 18.2 17.3
230.77 0.708 7.33 -1.72 -- 1.39 -- 2.3 -0.339 -- 17.48 55 18.1 19.7
270.89 0.772 7.32 -1.84 0.275 -- 1.49 -- -0.206 11.9 -- -- -- --
280.4 0.784 7.31 -1.78 0.274 -- -- -- -0.201 11.2 -- -- -- --
235.36 0.715 7.36 -1.95 -- 1.37 -- -- -0.357 -- 17.06 44 18.3 19.6
317.03 0.829 7.28 -- 1.13 1.55 -- -- -0.0195 15.1 -1.659 40 18.6 17.1
285.09 0.789 7.32 -1.79 -- -- -- -- -0.203 -- -- -- -- --
364.35 0.893 7.27 -- 0.293 -- -- -- -0.00196 11.6 -- -- -- --
340.27 0.859 7.3 -- -- 1.02 -- -- -0.127 -- 16.04 36 18.4 19.5
369.74 0.898 7.28 -- -- -- -- -- -0.00443 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 216.54 temperature 10.0 90 > th dose dependent rect. 18 17
5 222.28 wind 1.0 90 > th dose independent rect. 11 7
7 223.66 temperature 10.0 90 > th dose independent rect. 11 7
8 223.66 atmosphere 1015.0 90 < th dose independent rect. 11 7
9 223.66 temperature 10.0 90 > th dose independent rect. 18 17
10 223.67 wind 1.0 270 > th dose independent rect. 16 7
11 223.68 wind 9.0 90 < th dose independent rect. 11 7
13 223.82 atmosphere 995.0 90 > th dose independent rect. 18 17
14 224.13 wind 9.0 90 < th dose independent rect. 18 17
16 224.45 humidity 50.0 90 > th dose independent rect. 18 17
18 224.84 precipitation 0.1 90 < th dose independent rect. 11 7
19 224.84 precipitation 0.1 90 < th dose dependent rect. 11 7
23 225.08 temperature 15.0 10 > th dose dependent rect. 19 17
26 225.14 temperature 10.0 90 > th dose dependent rect. 18 7
30 225.52 temperature 10.0 270 > th dose dependent rect. 3 8
32 225.72 atmosphere 995.0 90 > th dose independent rect. 11 7
35 226.00 atmosphere 995.0 90 > th dose dependent rect. 11 7
47 227.17 temperature 30.0 90 < th dose dependent rect. 23 19
51 227.59 wind 1.0 90 > th dose independent rect. 18 5
52 227.59 wind 3.0 43200 < th dose dependent rect. 24 2
53 227.60 wind 1.0 90 > th dose independent rect. 18 7
54 227.62 atmosphere 995.0 270 > th dose independent rect. 23 17
56 227.79 wind 1.0 270 > th dose independent rect. 9 8
59 228.12 precipitation 0.1 270 < th dose independent rect. 23 16
60 228.12 precipitation 0.1 270 < th dose dependent rect. 23 16
62 228.36 temperature 30.0 10 < th dose dependent rect. 23 19
63 228.38 radiation 40.0 270 < th dose independent rect. 15 8
67 228.44 temperature 10.0 270 > th dose independent rect. 15 8
68 228.44 temperature 10.0 270 > th dose independent rect. 23 16
74 228.56 temperature 15.0 270 > th dose independent rect. 4 7
82 228.98 atmosphere 1015.0 90 < th dose independent rect. 18 17
88 229.12 wind 9.0 270 < th dose independent rect. 15 8
89 229.16 atmosphere 995.0 10 > th dose dependent rect. 12 6
90 229.23 precipitation 0.1 90 < th dose independent rect. 18 17
91 229.23 precipitation 0.1 90 < th dose dependent rect. 18 17
95 229.39 precipitation 0.1 270 < th dose independent rect. 9 8
96 229.39 precipitation 0.1 270 < th dose dependent rect. 9 8
97 229.44 wind 9.0 270 < th dose independent rect. 23 16
100 229.53 wind 3.0 43200 < th dose dependent rect. 23 4
105 229.70 precipitation 0.1 90 < th dose independent rect. 1 17
106 229.70 precipitation 0.1 90 < th dose dependent rect. 1 17
107 229.71 wind 7.0 270 < th dose independent rect. 4 7
109 229.79 atmosphere 1015.0 270 < th dose independent rect. 16 7
113 229.94 temperature 10.0 270 > th dose independent rect. 9 8
114 229.94 atmosphere 1015.0 270 < th dose independent rect. 9 8
116 229.99 temperature 10.0 90 > th dose independent rect. 18 7
117 229.99 humidity 50.0 90 > th dose independent rect. 18 7
118 229.99 radiation 10.0 90 < th dose independent rect. 18 7
122 229.99 temperature 10.0 90 > th dose independent rect. 1 17
123 229.99 atmosphere 1015.0 90 < th dose independent rect. 1 17
124 230.02 wind 9.0 90 < th dose independent rect. 18 7
126 230.08 precipitation 0.1 270 < th dose independent rect. 16 7
127 230.08 radiation 40.0 90 < th dose dependent rect. 18 7
128 230.08 precipitation 0.1 270 < th dose dependent rect. 16 7
130 230.09 atmosphere 995.0 90 > th dose independent rect. 1 17
138 230.18 atmosphere 995.0 90 > th dose independent rect. 18 7
139 230.24 atmosphere 1015.0 90 < th dose independent rect. 18 7
140 230.25 wind 9.0 270 < th dose independent rect. 9 8
141 230.26 atmosphere 995.0 270 > th dose independent rect. 11 17
146 230.38 temperature 25.0 10 > th dose independent rect. 18 18
150 230.44 wind 9.0 90 < th dose independent rect. 1 17
151 230.45 atmosphere 995.0 270 > th dose independent rect. 9 8
153 230.48 wind 3.0 14400 < th dose dependent rect. 19 19
154 230.49 wind 3.0 43200 < th dose dependent rect. 11 2
164 230.74 wind 3.0 14400 < th dose dependent rect. 23 15
168 230.76 temperature 30.0 10 < th dose dependent rect. 21 21
177 230.92 wind 3.0 43200 < th dose dependent rect. 21 7
188 231.03 radiation 1.0 270 < th dose dependent rect. 21 16
189 231.06 atmosphere 1015.0 270 < th dose independent rect. 23 16
191 231.06 radiation 1.0 270 < th dose dependent rect. 21 14
193 231.07 radiation 1.0 270 < th dose independent rect. 21 9
198 231.15 radiation 40.0 90 < th dose independent rect. 18 17
200 231.16 radiation 1.0 270 < th dose dependent rect. 21 9
207 231.18 precipitation 0.1 270 < th dose independent rect. 11 17
209 231.18 precipitation 0.1 270 < th dose dependent rect. 11 17
227 231.40 precipitation 0.1 270 < th dose independent rect. 4 7
228 231.40 precipitation 0.1 270 < th dose dependent rect. 4 7
239 231.52 temperature 25.0 10 < th dose independent rect. 22 21
241 231.55 radiation 10.0 90 < th dose dependent rect. 23 19
243 231.57 atmosphere 995.0 270 > th dose independent rect. 4 7
244 231.57 atmosphere 1015.0 270 < th dose independent rect. 4 7
245 231.57 temperature 10.0 270 > th dose independent rect. 11 17
249 231.59 wind 3.0 14400 < th dose dependent sin 5 NA
250 231.60 radiation 40.0 270 < th dose dependent rect. 15 8
253 231.64 wind 9.0 90 < th dose independent rect. 18 5
254 231.64 radiation 10.0 90 < th dose independent rect. 18 5
256 231.65 temperature 10.0 90 > th dose independent rect. 18 5
257 231.65 humidity 50.0 90 > th dose independent rect. 18 5
261 231.65 temperature 10.0 90 > th dose independent rect. 23 19
262 231.65 radiation 20.0 90 < th dose dependent rect. 18 5
266 231.67 humidity 50.0 270 > th dose independent rect. 4 7
273 231.74 wind 9.0 90 < th dose independent rect. 23 19
274 231.74 temperature 10.0 270 > th dose dependent rect. 16 7
282 231.80 atmosphere 995.0 90 > th dose independent rect. 18 5
284 231.82 temperature 25.0 10 > th dose independent rect. 18 20
310 231.99 wind 9.0 270 < th dose independent rect. 11 17
311 231.99 precipitation 0.1 90 < th dose independent rect. 23 19
315 231.99 precipitation 0.1 90 < th dose dependent rect. 23 19
317 232.00 wind 3.0 14400 < th dose dependent sin 11 NA
335 232.12 atmosphere 1015.0 90 < th dose independent rect. 18 5
369 232.29 wind 3.0 14400 < th dose dependent rect. 18 13
378 232.34 atmosphere 995.0 90 > th dose independent rect. 23 19
399 232.48 radiation 10.0 90 < th dose dependent rect. 21 21
400 232.50 wind 3.0 43200 < th dose dependent rect. 20 11
431 232.72 wind 1.0 90 > th dose independent rect. 1 17
438 232.78 wind 9.0 270 < th dose dependent rect. 4 7
442 232.82 temperature 15.0 270 > th dose independent rect. 5 16
448 232.88 radiation 1.0 270 > th dose independent rect. 10 7
458 232.94 wind 3.0 14400 < th dose independent rect. 17 14
466 233.00 humidity 50.0 270 > th dose independent rect. 23 16
497 233.24 wind 3.0 14400 < th dose independent rect. 24 14
525 233.36 radiation 1.0 270 < th dose dependent rect. 18 2
556 233.50 temperature 15.0 10 > th dose dependent rect. 6 6
590 233.66 wind 3.0 14400 < th dose independent sin 11 NA
611 233.72 radiation 1.0 1440 < th dose dependent rect. 19 7
617 233.74 atmosphere 1015.0 270 < th dose independent rect. 5 16
664 233.95 temperature 30.0 90 < th dose independent rect. 18 5
678 234.00 wind 3.0 14400 < th dose independent rect. 19 19
680 234.04 wind 3.0 14400 > th dose independent rect. 17 14
691 234.09 precipitation 0.1 90 < th dose independent rect. 18 7
692 234.09 precipitation 0.1 90 < th dose dependent rect. 18 7
699 234.12 wind 3.0 14400 < th dose independent sin 5 NA
721 234.19 atmosphere 995.0 270 > th dose independent rect. 16 7
724 234.21 temperature 10.0 270 > th dose independent rect. 21 8
725 234.21 temperature 30.0 270 < th dose independent rect. 21 8
726 234.21 humidity 50.0 270 > th dose independent rect. 21 8
729 234.21 atmosphere 995.0 270 > th dose independent rect. 21 8
730 234.21 radiation 20.0 270 < th dose independent rect. 21 8
743 234.23 wind 3.0 14400 > th dose independent rect. 24 14
744 234.23 radiation 30.0 270 < th dose dependent rect. 21 8
748 234.24 wind 9.0 270 < th dose independent rect. 21 8
761 234.31 wind 3.0 43200 < th dose dependent rect. 10 22
772 234.36 wind 3.0 14400 < th dose dependent no NA NA
779 234.38 wind 3.0 14400 < th dose dependent rect. 12 23
783 234.41 radiation 1.0 270 < th dose independent rect. 21 16
791 234.43 radiation 1.0 270 < th dose independent rect. 21 14
798 234.46 wind 1.0 43200 > th dose independent rect. 6 7
819 234.54 radiation 1.0 270 < th dose independent rect. 18 2
850 234.68 radiation 40.0 14400 < th dose dependent rect. 19 7
871 234.72 temperature 30.0 90 < th dose independent rect. 18 17
913 234.84 wind 3.0 14400 > th dose independent sin 11 NA
925 234.89 precipitation 0.1 10 < th dose independent rect. 18 7
928 234.89 precipitation 0.1 10 < th dose dependent rect. 18 7
932 234.90 wind 9.0 270 < th dose independent rect. 18 2
933 234.90 temperature 10.0 270 > th dose independent rect. 18 2
934 234.90 humidity 50.0 270 > th dose independent rect. 18 2
935 234.90 atmosphere 1015.0 270 < th dose independent rect. 18 2
936 234.90 radiation 20.0 270 < th dose independent rect. 18 2
942 234.90 temperature 10.0 270 > th dose independent rect. 20 22
962 234.97 wind 3.0 43200 < th dose independent rect. 12 1
977 235.01 temperature 10.0 1440 > th dose independent rect. 19 7
980 235.01 temperature 30.0 1440 < th dose independent rect. 19 7
984 235.01 humidity 50.0 1440 > th dose independent rect. 19 7
986 235.01 atmosphere 995.0 1440 > th dose independent rect. 19 7
987 235.01 radiation 1.0 1440 < th dose independent rect. 19 7