Os04g0674800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CEL1=CELLULASE 1 (Fragment).
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Os04g0674800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CEL1=CELLULASE 1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.03 | 0.681 | 3.5 | 2.71 | 0.499 | -1.7 | 2.17 | -0.595 | 0.224 | 23.3 | 19.96 | 1570 | -- | -- |
| 210.21 | 0.675 | 3.48 | 2.85 | 0.51 | -1.66 | 2.15 | -- | 0.258 | 23.5 | 20.6 | 1545 | -- | -- |
| 230.13 | 0.707 | 3.5 | 2.68 | 0.49 | -1.69 | -- | -0.357 | 0.227 | 23.2 | 20.49 | 1611 | -- | -- |
| 230.24 | 0.707 | 3.48 | 2.77 | 0.49 | -1.69 | -- | -- | 0.257 | 23.1 | 20.66 | 1605 | -- | -- |
| 244.98 | 0.729 | 3.49 | 2.66 | -- | -1.66 | -- | -0.422 | 0.222 | -- | 20.39 | 1606 | -- | -- |
| 299.92 | 0.812 | 3.57 | 2.24 | 0.455 | -- | 2.13 | -- | -0.133 | 23.2 | -- | -- | -- | -- |
| 319.27 | 0.837 | 3.57 | 2.15 | 0.445 | -- | -- | -- | -0.141 | 23.3 | -- | -- | -- | -- |
| 245.12 | 0.729 | 3.47 | 2.78 | -- | -1.67 | -- | -- | 0.253 | -- | 20.6 | 1602 | -- | -- |
| 410.11 | 0.943 | 3.59 | -- | 0.543 | -0.98 | -- | -- | -0.193 | 23.1 | 22.2 | 1881 | -- | -- |
| 331.66 | 0.851 | 3.56 | 2.16 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 441.31 | 0.983 | 3.62 | -- | 0.468 | -- | -- | -- | -0.381 | 23.6 | -- | -- | -- | -- |
| 419.47 | 0.957 | 3.58 | -- | -- | -1.2 | -- | -- | -0.21 | -- | 20.6 | 1602 | -- | -- |
| 455.1 | 0.996 | 3.61 | -- | -- | -- | -- | -- | -0.377 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.06 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 2 | 208.09 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 8 | 208.29 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 9 | 208.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 11 |
| 19 | 208.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 35 | 208.75 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 39 | 208.77 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 41 | 208.78 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 57 | 208.82 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 80 | 208.96 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 116 | 209.11 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 122 | 209.18 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 127 | 209.20 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 129 | 209.20 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 145 | 209.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 181 | 209.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 186 | 209.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 190 | 209.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 194 | 209.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 214 | 209.79 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 218 | 209.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 222 | 209.82 | radiation | 1.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 225 | 209.82 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 240 | 209.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 247 | 209.87 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 249 | 209.87 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 254 | 209.87 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 259 | 209.88 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 271 | 209.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 294 | 209.94 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 304 | 209.98 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 312 | 210.00 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 330 | 210.03 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 340 | 210.10 | radiation | 1.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 376 | 210.19 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 386 | 210.19 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 399 | 210.20 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 417 | 210.25 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 446 | 210.30 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 459 | 210.35 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 460 | 210.35 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 490 | 210.44 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 4 |
| 504 | 210.46 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 518 | 210.50 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 551 | 210.58 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 14 |
| 634 | 210.72 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 641 | 210.73 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 643 | 210.73 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 652 | 210.75 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 658 | 210.77 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 681 | 210.83 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 689 | 210.84 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 709 | 210.88 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 711 | 210.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 858 | 211.11 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 863 | 211.12 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 875 | 211.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 876 | 211.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 902 | 211.16 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 965 | 211.23 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 985 | 211.26 | radiation | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 992 | 211.26 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 22 |