Os04g0674300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os04g0674300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.76 | 0.711 | 4.78 | -1.71 | 1.43 | -0.839 | -1.29 | -2.91 | -0.17 | 5.06 | 1.509 | 4417 | -- | -- |
| 238.42 | 0.719 | 4.74 | -1.18 | 1.43 | -0.679 | -1.06 | -- | -0.137 | 5.02 | 2.11 | 4435 | -- | -- |
| 232.9 | 0.711 | 4.78 | -1.7 | 1.44 | -0.819 | -- | -2.79 | -0.167 | 5.05 | 1.51 | 4402 | -- | -- |
| 240.56 | 0.722 | 4.73 | -1.14 | 1.4 | -0.756 | -- | -- | -0.0254 | 5.14 | 2.1 | 4437 | -- | -- |
| 261.37 | 0.753 | 4.72 | -0.939 | -- | -2.17 | -- | -0.826 | 0.191 | -- | 1.863 | 4943 | -- | -- |
| 249.08 | 0.74 | 4.77 | -1.24 | 1.46 | -- | -1.11 | -- | -0.214 | 4.88 | -- | -- | -- | -- |
| 252.25 | 0.744 | 4.77 | -1.23 | 1.45 | -- | -- | -- | -0.208 | 4.85 | -- | -- | -- | -- |
| 261.63 | 0.753 | 4.71 | -0.94 | -- | -2.2 | -- | -- | 0.17 | -- | 1.87 | 4945 | -- | -- |
| 267.63 | 0.762 | 4.7 | -- | 1.37 | -1.05 | -- | -- | 0.198 | 5.18 | 1.864 | 13145 | -- | -- |
| 363.64 | 0.891 | 4.78 | -1.18 | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
| 292.3 | 0.8 | 4.74 | -- | 1.43 | -- | -- | -- | -0.0709 | 4.88 | -- | -- | -- | -- |
| 284.58 | 0.786 | 4.68 | -- | -- | -2.32 | -- | -- | 0.291 | -- | 1.86 | 4944 | -- | -- |
| 400.29 | 0.934 | 4.75 | -- | -- | -- | -- | -- | -0.0399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 228.60 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 228.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 5 | 228.70 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 6 | 228.74 | temperature | 30 | 90 | < th | dose independent | rect. | 8 | 22 |
| 9 | 228.77 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 22 | 228.90 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 29 | 228.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 41 | 229.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 64 | 229.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 68 | 229.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 114 | 229.19 | temperature | 25 | 14400 | > th | dose dependent | sin | 5 | NA |
| 123 | 229.21 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 9 |
| 217 | 229.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 237 | 229.42 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 258 | 229.45 | temperature | 30 | 14400 | < th | dose independent | sin | 4 | NA |
| 293 | 229.48 | temperature | 30 | 14400 | > th | dose independent | sin | 4 | NA |
| 349 | 229.58 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 358 | 229.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 378 | 229.62 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 383 | 229.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 398 | 229.66 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 463 | 229.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 18 |
| 563 | 229.89 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 710 | 229.94 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 827 | 230.00 | wind | 3 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 864 | 230.06 | wind | 3 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 880 | 230.08 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 883 | 230.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 910 | 230.10 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 916 | 230.12 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 918 | 230.12 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 928 | 230.13 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 21 |
| 978 | 230.19 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 1 |