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Os04g0672100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.14 (0.0199) R2 : 0.625
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.35 (0.0488) R2dC : 0.629 R2C : 0.625
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00192 (0.0417) R2dN8 : 2.24e-06 R2N8 : -0.00381
σ : 0.374
deviance : 63.87
__
_____
C
peak time of C : 9.45
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.98 0.348 9.16 -0.00628 0.969 -0.749 0.275 -0.406 -0.0435 6.74 0.835 85 -- --
55.89 0.348 9.16 -0.0216 0.966 -0.742 0.381 -- -0.0443 6.76 0.9428 83 -- --
55.09 0.346 9.16 -0.00352 0.97 -0.727 -- -0.441 -0.0484 6.83 0.895 82 -- --
56.06 0.349 9.16 -0.00775 0.955 -0.694 -- -- -0.0449 7.02 0.9101 74 -- --
88.67 0.441 9.17 0.0101 -- -0.864 -- -0.301 -0.00744 -- 1.939 28 -- --
63.42 0.373 9.13 0.0239 1.35 -- 0.34 -- 0.00557 9.46 -- -- -- --
63.84 0.374 9.13 0.0363 1.35 -- -- -- 0.00596 9.45 -- -- -- --
87.83 0.436 9.18 0.00187 -- -0.881 -- -- -0.0681 -- 5.543 7 -- --
55.99 0.349 9.16 -- 0.933 -0.699 -- -- -0.0425 7.04 0.9945 70 -- --
170.47 0.61 9.17 0.0278 -- -- -- -- 0.0102 -- -- -- -- --
63.87 0.374 9.14 -- 1.35 -- -- -- 0.00192 9.45 -- -- -- --
87.69 0.436 9.18 -- -- -0.899 -- -- -0.0334 -- 5.774 7 -- --
170.49 0.609 9.17 -- -- -- -- -- 0.00712 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.58 radiation 20.0 14400 < th dose independent rect. 3 3
2 48.76 humidity 70.0 720 > th dose independent rect. 19 4
3 48.88 radiation 20.0 14400 < th dose independent rect. 1 5
4 49.08 humidity 70.0 720 > th dose independent rect. 19 12
6 49.34 humidity 70.0 720 > th dose independent rect. 18 14
8 49.54 humidity 70.0 720 > th dose independent rect. 19 6
9 49.59 temperature 10.0 90 > th dose dependent rect. 8 21
13 50.08 temperature 30.0 720 < th dose independent rect. 18 14
15 50.27 wind 3.0 30 < th dose dependent rect. 2 3
16 50.31 radiation 20.0 14400 < th dose independent rect. 20 10
17 50.34 wind 9.0 1440 < th dose independent rect. 6 3
18 50.34 temperature 10.0 1440 > th dose independent rect. 6 3
21 50.34 humidity 50.0 1440 > th dose independent rect. 6 3
23 50.34 atmosphere 995.0 1440 > th dose independent rect. 6 3
24 50.34 atmosphere 1015.0 1440 < th dose independent rect. 6 3
25 50.34 temperature 10.0 1440 > th dose independent rect. 9 21
29 50.47 atmosphere 1015.0 90 < th dose independent rect. 8 21
30 50.62 temperature 10.0 270 > th dose dependent rect. 23 12
33 50.69 radiation 40.0 4320 < th dose dependent rect. 3 2
34 50.70 temperature 30.0 90 < th dose dependent rect. 5 6
36 50.74 temperature 20.0 90 > th dose dependent rect. 1 4
38 50.81 temperature 20.0 30 > th dose independent rect. 2 3
39 50.81 radiation 1.0 90 < th dose independent rect. 17 12
42 50.99 wind 3.0 30 < th dose dependent rect. 24 5
43 51.00 radiation 40.0 4320 < th dose dependent rect. 1 4
44 51.01 atmosphere 1010.0 90 < th dose independent rect. 5 3
49 51.10 temperature 15.0 90 > th dose dependent rect. 23 6
53 51.18 radiation 1.0 90 < th dose dependent rect. 17 12
54 51.23 wind 5.0 90 < th dose independent rect. 5 3
55 51.28 precipitation 0.1 90 < th dose independent rect. 5 3
56 51.28 temperature 20.0 270 > th dose dependent rect. 24 2
57 51.28 precipitation 0.1 90 < th dose dependent rect. 5 3
61 51.32 temperature 10.0 90 > th dose independent rect. 5 3
63 51.32 temperature 30.0 90 < th dose independent rect. 5 3
64 51.32 humidity 50.0 90 > th dose independent rect. 5 3
66 51.32 atmosphere 995.0 90 > th dose independent rect. 5 3
68 51.32 temperature 10.0 90 > th dose independent rect. 8 21
72 51.36 radiation 40.0 90 < th dose independent rect. 5 3
75 51.40 wind 9.0 90 < th dose dependent rect. 5 3
90 51.63 wind 9.0 90 < th dose independent rect. 8 21
91 51.66 temperature 10.0 720 > th dose dependent rect. 17 2
103 51.77 temperature 10.0 720 > th dose dependent rect. 16 12
110 51.85 humidity 80.0 30 > th dose dependent rect. 2 3
111 51.86 radiation 1.0 90 < th dose dependent sin 9 NA
116 51.92 temperature 30.0 90 < th dose dependent rect. 5 4
118 51.95 radiation 1.0 90 > th dose independent sin 10 NA
119 51.95 radiation 40.0 90 < th dose dependent rect. 5 3
121 51.97 wind 1.0 30 > th dose independent rect. 5 3
123 51.99 humidity 90.0 30 > th dose independent rect. 2 3
124 52.00 radiation 1.0 90 < th dose independent sin 10 NA
139 52.03 precipitation 0.1 90 < th dose independent rect. 5 13
141 52.03 precipitation 0.1 90 < th dose dependent rect. 5 13
143 52.04 radiation 40.0 4320 < th dose dependent rect. 20 9
148 52.09 temperature 30.0 720 < th dose dependent rect. 20 3
149 52.10 humidity 70.0 720 > th dose independent rect. 19 2
156 52.14 radiation 10.0 1440 < th dose independent rect. 3 2
157 52.14 atmosphere 995.0 90 > th dose independent rect. 8 21
163 52.17 radiation 1.0 30 > th dose independent rect. 5 3
174 52.17 humidity 50.0 720 > th dose dependent rect. 19 4
202 52.28 humidity 50.0 90 > th dose dependent rect. 5 3
219 52.38 humidity 70.0 720 < th dose independent rect. 19 12
230 52.43 temperature 10.0 90 > th dose dependent rect. 5 3
233 52.44 radiation 10.0 90 < th dose dependent rect. 9 20
242 52.46 temperature 30.0 720 < th dose dependent rect. 20 1
266 52.53 radiation 10.0 90 < th dose dependent rect. 13 16
268 52.54 humidity 70.0 720 < th dose independent rect. 19 1
280 52.54 wind 9.0 90 < th dose dependent rect. 18 11
281 52.55 wind 3.0 90 < th dose independent rect. 1 4
282 52.55 temperature 30.0 720 < th dose independent rect. 18 7
283 52.55 temperature 10.0 90 > th dose dependent rect. 19 10
299 52.64 humidity 50.0 90 > th dose dependent rect. 17 12
300 52.65 humidity 60.0 90 > th dose dependent rect. 5 6
301 52.65 temperature 30.0 90 < th dose dependent rect. 5 8
303 52.66 radiation 10.0 1440 < th dose independent rect. 1 4
321 52.68 temperature 25.0 720 > th dose dependent rect. 17 6
323 52.70 atmosphere 1015.0 90 < th dose dependent rect. 5 2
339 52.74 temperature 30.0 270 < th dose dependent rect. 5 1
340 52.74 wind 5.0 270 < th dose dependent rect. 24 2
366 52.79 radiation 1.0 90 > th dose dependent rect. 18 13
371 52.80 atmosphere 995.0 90 > th dose dependent rect. 5 3
384 52.83 precipitation 0.1 90 < th dose independent rect. 8 21
387 52.83 precipitation 0.1 90 < th dose dependent rect. 8 21
396 52.85 radiation 1.0 90 > th dose dependent rect. 4 3
408 52.87 humidity 60.0 90 > th dose independent rect. 18 11
416 52.89 precipitation 0.1 90 < th dose independent rect. 5 20
418 52.89 precipitation 0.1 90 < th dose dependent rect. 5 20
424 52.90 humidity 70.0 720 < th dose dependent rect. 19 12
436 52.94 humidity 70.0 720 < th dose dependent rect. 19 1
452 52.95 humidity 60.0 90 > th dose dependent rect. 5 8
456 52.97 temperature 30.0 90 < th dose independent rect. 18 11
461 52.98 humidity 70.0 90 > th dose independent rect. 5 6
482 53.03 humidity 50.0 30 > th dose independent rect. 8 21
485 53.04 atmosphere 1015.0 90 < th dose independent rect. 18 11
509 53.10 wind 9.0 90 < th dose independent rect. 5 13
521 53.13 wind 3.0 270 < th dose independent rect. 24 2
555 53.21 temperature 20.0 270 > th dose independent rect. 24 2
577 53.25 radiation 20.0 14400 < th dose independent rect. 22 8
580 53.25 temperature 30.0 720 > th dose dependent rect. 18 1
605 53.28 temperature 10.0 90 > th dose independent rect. 18 11
610 53.28 temperature 10.0 90 > th dose independent rect. 5 13
611 53.28 atmosphere 1015.0 90 < th dose independent rect. 5 13
617 53.29 wind 9.0 90 < th dose independent rect. 18 11
618 53.29 atmosphere 995.0 90 > th dose independent rect. 18 11
652 53.37 humidity 90.0 10 < th dose independent rect. 5 3
655 53.38 wind 5.0 43200 > th dose dependent rect. 11 3
694 53.45 wind 7.0 43200 < th dose independent rect. 9 6
700 53.46 wind 7.0 43200 > th dose independent rect. 9 6
701 53.46 humidity 90.0 43200 > th dose dependent rect. 5 1
706 53.47 wind 7.0 43200 < th dose independent rect. 10 4
719 53.49 wind 7.0 43200 < th dose independent rect. 11 2
730 53.50 radiation 1.0 43200 > th dose independent rect. 9 1
732 53.50 precipitation 0.1 90 < th dose independent rect. 1 4
738 53.50 radiation 1.0 43200 < th dose dependent rect. 6 4
739 53.50 precipitation 0.1 90 < th dose dependent rect. 1 4
741 53.51 radiation 1.0 43200 < th dose dependent rect. 6 2
754 53.53 radiation 1.0 43200 < th dose independent rect. 9 1
767 53.55 humidity 90.0 43200 > th dose dependent rect. 3 8
789 53.58 temperature 30.0 270 < th dose dependent rect. 3 6
809 53.61 wind 7.0 43200 > th dose independent rect. 11 2
820 53.61 humidity 90.0 43200 > th dose dependent rect. 19 17
823 53.62 radiation 1.0 43200 < th dose independent rect. 6 3
831 53.62 radiation 1.0 90 < th dose dependent rect. 1 4
853 53.63 radiation 1.0 43200 < th dose independent rect. 6 5
856 53.63 humidity 90.0 43200 > th dose dependent sin 5 NA
867 53.64 radiation 1.0 43200 > th dose independent rect. 6 3
885 53.65 radiation 1.0 43200 > th dose independent rect. 6 5
928 53.67 atmosphere 1015.0 90 < th dose independent rect. 23 6
943 53.68 wind 9.0 1440 < th dose independent rect. 3 3
944 53.68 temperature 10.0 1440 > th dose independent rect. 3 3
947 53.68 temperature 30.0 1440 < th dose independent rect. 3 3
951 53.68 humidity 50.0 1440 > th dose independent rect. 3 3
960 53.68 atmosphere 995.0 1440 > th dose independent rect. 3 3
974 53.68 temperature 10.0 1440 > th dose independent rect. 6 21
999 53.69 radiation 1.0 90 < th dose independent rect. 1 4