Os04g0671200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Suppressor of presenilin 5 (P110b homolog).
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Os04g0671200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Suppressor of presenilin 5 (P110b homolog).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.87 | 0.514 | 8.93 | 0.298 | 2.46 | -1.32 | -0.629 | 1.63 | 0.146 | 9.94 | 21.3 | 3109 | -- | -- |
| 122.77 | 0.516 | 8.97 | -0.0754 | 2.44 | -1.62 | -0.601 | -- | 0.12 | 9.79 | 21.3 | 2715 | -- | -- |
| 120.02 | 0.51 | 8.94 | 0.175 | 2.44 | -1.35 | -- | 1.42 | 0.115 | 9.89 | 21.32 | 2675 | -- | -- |
| 123.67 | 0.518 | 9 | -0.173 | 2.45 | -1.49 | -- | -- | 0.0418 | 9.88 | 21.32 | 2677 | -- | -- |
| 433.71 | 0.97 | 8.98 | 0.57 | -- | -1.61 | -- | 1.49 | 0.19 | -- | 21.8 | 812 | -- | -- |
| 180.19 | 0.629 | 9.1 | -0.916 | 2.49 | -- | -0.643 | -- | -0.415 | 10 | -- | -- | -- | -- |
| 181.8 | 0.631 | 9.1 | -0.941 | 2.49 | -- | -- | -- | -0.416 | 10 | -- | -- | -- | -- |
| 433.52 | 0.97 | 9.07 | -0.291 | -- | -1.97 | -- | -- | 0.0303 | -- | 21.3 | 816 | -- | -- |
| 124.29 | 0.519 | 8.99 | -- | 2.44 | -1.57 | -- | -- | 0.076 | 9.89 | 21.31 | 2708 | -- | -- |
| 555.35 | 1.1 | 9.17 | -0.972 | -- | -- | -- | -- | -0.418 | -- | -- | -- | -- | -- |
| 205.14 | 0.67 | 9.08 | -- | 2.49 | -- | -- | -- | -0.311 | 10 | -- | -- | -- | -- |
| 431.57 | 0.968 | 9.03 | -- | -- | -1.83 | -- | -- | 0.184 | -- | 21.81 | 830 | -- | -- |
| 580.27 | 1.12 | 9.14 | -- | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.19 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 2 | 117.78 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 3 | 118.68 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 4 | 118.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 5 | 119.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 9 | 119.29 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 12 | 119.37 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 16 | 119.50 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 18 | 119.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 19 | 119.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 21 | 119.68 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 22 | 119.70 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 23 | 119.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 12 |
| 28 | 119.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 30 | 119.88 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 39 | 120.03 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 60 | 120.26 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 65 | 120.29 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 92 | 120.55 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 119 | 120.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 141 | 121.07 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 142 | 121.08 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 162 | 121.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 168 | 121.27 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 171 | 121.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 185 | 121.47 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 243 | 121.83 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 322 | 122.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 326 | 122.24 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 332 | 122.27 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 383 | 122.48 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 393 | 122.52 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 398 | 122.53 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 434 | 122.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 477 | 122.80 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 485 | 122.82 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 520 | 122.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 529 | 122.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 673 | 123.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 705 | 123.34 | wind | 9 | 43200 | < th | dose independent | sin | 1 | NA |
| 780 | 123.47 | wind | 9 | 43200 | > th | dose independent | sin | 0 | NA |
| 829 | 123.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 843 | 123.58 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 19 |
| 875 | 123.64 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 883 | 123.65 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 971 | 123.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 989 | 123.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 20 |