Os04g0670500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1).
FiT-DB / Search/ Help/ Sample detail
|
Os04g0670500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.38 | 0.442 | 2.85 | -0.0544 | 0.0141 | 2.66 | 0.319 | -12 | 0.0516 | 6.31 | 1.901 | 9 | 5.68 | 0.202 |
| 105.22 | 0.478 | 2.86 | -0.0641 | 0.0484 | 3.57 | -0.372 | -- | 0.0291 | 5.64 | 2.058 | 23 | 5.68 | 0.446 |
| 87.6 | 0.436 | 2.86 | -0.0618 | 0.00139 | 2.99 | -- | -11.9 | 0.0471 | 5.46 | 2.201 | 8 | 5.7 | 0.194 |
| 101.48 | 0.469 | 2.85 | -0.0666 | 0.0512 | 3.74 | -- | -- | 0.0371 | 4.6 | 2.091 | 22 | 5.69 | 0.109 |
| 87.43 | 0.435 | 2.86 | -0.0581 | -- | 3.27 | -- | -12.5 | 0.0524 | -- | 2.253 | 8 | 5.71 | 0.183 |
| 123.02 | 0.52 | 2.86 | -0.121 | 0.132 | -- | -0.463 | -- | -0.00147 | 4.88 | -- | -- | -- | -- |
| 123.57 | 0.521 | 2.86 | -0.119 | 0.129 | -- | -- | -- | 0.000793 | 4.65 | -- | -- | -- | -- |
| 101.43 | 0.469 | 2.85 | -0.0513 | -- | 4.13 | -- | -- | 0.0426 | -- | 2.194 | 72 | 5.7 | 0.117 |
| 98.55 | 0.462 | 2.84 | -- | 0.0773 | 3.97 | -- | -- | 0.0675 | 4.32 | 2.296 | 21 | 5.77 | 0.00692 |
| 124.45 | 0.521 | 2.86 | -0.114 | -- | -- | -- | -- | 0.00417 | -- | -- | -- | -- | -- |
| 123.94 | 0.521 | 2.86 | -- | 0.127 | -- | -- | -- | 0.0141 | 4.68 | -- | -- | -- | -- |
| 98.15 | 0.461 | 2.86 | -- | -- | 4.07 | -- | -- | 0.0415 | -- | 2.511 | 29 | 5.77 | 0.0137 |
| 124.8 | 0.521 | 2.86 | -- | -- | -- | -- | -- | 0.0169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.42 | wind | 1.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 100.93 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 4 | 100.93 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 12 | 100.95 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 26 | 100.98 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 36 | 100.98 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 57 | 102.21 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 62 | 102.85 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 70 | 103.97 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 80 | 103.97 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 90 | 104.30 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 93 | 104.91 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 126 | 107.01 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 131 | 107.17 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 133 | 107.17 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 140 | 107.17 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 141 | 107.17 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 145 | 107.19 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 334 | 110.34 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 373 | 111.71 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 419 | 112.49 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 4 |
| 427 | 112.62 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 463 | 113.27 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 543 | 114.06 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 548 | 114.12 | wind | 7.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 550 | 114.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 553 | 114.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 557 | 114.12 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 562 | 114.12 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 563 | 114.12 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 564 | 114.12 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 568 | 114.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 572 | 114.16 | wind | 7.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 574 | 114.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 577 | 114.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 581 | 114.16 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 583 | 114.16 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 586 | 114.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 587 | 114.16 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 591 | 114.23 | precipitation | 0.1 | 10 | < th | dose independent | sin | 0 | NA |
| 592 | 114.23 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 0 | NA |
| 593 | 114.24 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 595 | 114.25 | precipitation | 0.1 | 10 | > th | dose independent | sin | 0 | NA |
| 597 | 114.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 23 |
| 599 | 114.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 620 | 114.35 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 621 | 114.35 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 622 | 114.35 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 630 | 114.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 22 |
| 631 | 114.47 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 23 |
| 633 | 114.52 | wind | 1.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 637 | 114.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 727 | 115.08 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 758 | 115.37 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 763 | 115.41 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 804 | 115.69 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 12 |
| 808 | 115.71 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 852 | 115.84 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 902 | 115.96 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 914 | 116.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 921 | 116.05 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 956 | 116.12 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 975 | 116.17 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |