Os04g0670400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os04g0670400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.62 | 0.268 | 8.92 | -1.61 | 0.645 | -1.16 | -0.601 | 0.279 | -0.126 | 14.5 | 29.58 | 14 | -- | -- |
| 32.69 | 0.266 | 8.91 | -1.56 | 0.637 | -1.17 | -0.694 | -- | -0.117 | 14.4 | 29.49 | 13 | -- | -- |
| 33.55 | 0.27 | 8.93 | -1.68 | 0.663 | -1.1 | -- | 0.719 | -0.133 | 14.5 | 29.52 | 14 | -- | -- |
| 34.3 | 0.273 | 8.92 | -1.59 | 0.699 | -1.14 | -- | -- | -0.131 | 14.4 | 27.79 | 50 | -- | -- |
| 50.41 | 0.331 | 8.96 | -1.83 | -- | -1.77 | -- | 0.638 | -0.259 | -- | 30.08 | 2 | -- | -- |
| 51.01 | 0.335 | 8.86 | -1.28 | 1.03 | -- | -0.548 | -- | 0.12 | 14.4 | -- | -- | -- | -- |
| 52.11 | 0.338 | 8.86 | -1.3 | 1.03 | -- | -- | -- | 0.116 | 14.4 | -- | -- | -- | -- |
| 50.98 | 0.333 | 8.95 | -1.73 | -- | -1.77 | -- | -- | -0.239 | -- | 30 | 2 | -- | -- |
| 92.54 | 0.45 | 8.85 | -- | 0.909 | -0.489 | -- | -- | 0.168 | 14.5 | 27.79 | 50 | -- | -- |
| 115.06 | 0.501 | 8.87 | -1.34 | -- | -- | -- | -- | 0.091 | -- | -- | -- | -- | -- |
| 96.34 | 0.459 | 8.83 | -- | 1.06 | -- | -- | -- | 0.261 | 14.4 | -- | -- | -- | -- |
| 125.25 | 0.523 | 8.88 | -- | -- | -1.34 | -- | -- | 0.0422 | -- | 30.9 | 15 | -- | -- |
| 162.37 | 0.595 | 8.84 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 32.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 23 |
| 4 | 32.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 5 | 32.72 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 7 | 32.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 10 | 32.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 14 | 32.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 17 | 33.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 18 | 33.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 20 | 33.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 25 | 33.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 31 | 33.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 34 | 33.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 40 | 33.50 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 171 | 34.77 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 198 | 34.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 251 | 35.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 313 | 35.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 358 | 35.83 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 370 | 35.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 395 | 36.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 428 | 36.07 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 459 | 36.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 469 | 36.16 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 481 | 36.19 | temperature | 10 | 90 | > th | dose dependent | sin | 8 | NA |
| 487 | 36.19 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 492 | 36.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 495 | 36.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 555 | 36.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 629 | 36.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 630 | 36.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 663 | 36.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 798 | 36.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 814 | 36.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 854 | 36.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 896 | 36.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 929 | 36.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 944 | 36.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 957 | 36.75 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 993 | 36.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |