Os04g0669100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0669100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.64 | 0.26 | 11.3 | 0.29 | 0.993 | -1.41 | -0.0961 | 1.98 | -0.0485 | 6.88 | 17.25 | 198 | -- | -- |
| 33.27 | 0.269 | 11.4 | -0.0254 | 0.942 | -1.45 | -0.562 | -- | -0.136 | 6.16 | 15.09 | 369 | -- | -- |
| 30.66 | 0.258 | 11.3 | 0.299 | 0.989 | -1.4 | -- | 2.03 | -0.0447 | 6.87 | 17.46 | 201 | -- | -- |
| 33.99 | 0.272 | 11.4 | -0.0425 | 0.943 | -1.42 | -- | -- | -0.137 | 6.37 | 15.4 | 332 | -- | -- |
| 63.18 | 0.37 | 11.3 | 0.636 | -- | -1.99 | -- | 2.79 | 0.136 | -- | 20.44 | 389 | -- | -- |
| 57.24 | 0.355 | 11.4 | -0.354 | 1.35 | -- | -0.29 | -- | -0.356 | 6.01 | -- | -- | -- | -- |
| 57.45 | 0.355 | 11.4 | -0.356 | 1.35 | -- | -- | -- | -0.354 | 6.03 | -- | -- | -- | -- |
| 67.38 | 0.382 | 11.4 | 0.157 | -- | -2 | -- | -- | 0.00219 | -- | 17.9 | 384 | -- | -- |
| 33.87 | 0.271 | 11.4 | -- | 0.961 | -1.47 | -- | -- | -0.139 | 6.7 | 15.2 | 250 | -- | -- |
| 152.39 | 0.577 | 11.4 | -0.317 | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
| 60.79 | 0.365 | 11.4 | -- | 1.35 | -- | -- | -- | -0.315 | 6.04 | -- | -- | -- | -- |
| 67.91 | 0.384 | 11.4 | -- | -- | -1.95 | -- | -- | -0.0208 | -- | 18 | 384 | -- | -- |
| 155.04 | 0.581 | 11.4 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 6 | 29.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 13 | 30.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 35 | 30.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 55 | 31.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 66 | 31.23 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 69 | 31.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 98 | 31.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 112 | 31.72 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 121 | 31.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 125 | 31.77 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 134 | 31.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 141 | 31.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 199 | 31.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 207 | 31.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 228 | 31.94 | temperature | 15 | 1440 | > th | dose dependent | sin | 5 | NA |
| 240 | 31.95 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 247 | 31.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 451 | 32.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 610 | 32.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 696 | 32.29 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 16 |
| 822 | 32.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 928 | 32.39 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 930 | 32.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 933 | 32.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |