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Os04g0668600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0139) R2 : 0.612
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.884 (0.033) R2dC : 0.612 R2C : 0.611
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0232 (0.0292) R2dN8 : 0.000694 R2N8 : -0.000747
σ : 0.262
deviance : 31.27
__
_____
C
peak time of C : 23.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.36 0.25 12 0.0738 1.15 0.275 0.298 0.22 0.0338 23.9 12.45 10 -- --
28.47 0.249 12 0.0756 1.16 0.273 0.106 -- 0.0376 23.9 12.54 9 -- --
28.42 0.248 12 0.0739 1.14 0.266 -- 0.0389 0.0339 23.8 15.6 9 -- --
28.36 0.248 12 0.0765 1.14 0.283 -- -- 0.0314 23.9 15.87 9 -- --
30.36 0.257 12 0.205 -- -0.723 -- -0.191 0.0704 -- 0.0338 37 -- --
31.04 0.261 12 0.0948 0.883 -- 0.0301 -- 0.0337 23.8 -- -- -- --
31.04 0.261 12 0.0936 0.882 -- -- -- 0.0336 23.8 -- -- -- --
29.23 0.252 12 0.203 -- -0.706 -- -- 0.0704 -- 0.01217 32 -- --
28.5 0.249 12 -- 1.14 0.279 -- -- 0.0271 23.9 15.87 9 -- --
80.04 0.418 12 0.12 -- -- -- -- 0.0448 -- -- -- -- --
31.27 0.262 12 -- 0.884 -- -- -- 0.0232 23.8 -- -- -- --
30.12 0.256 12 -- -- -0.697 -- -- 0.0692 -- 0.006403 30 -- --
80.42 0.419 12 -- -- -- -- -- 0.0315 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.84 temperature 10.0 270 > th dose dependent rect. 18 8
2 23.93 radiation 1.0 30 < th dose dependent sin 14 NA
7 24.21 temperature 30.0 270 < th dose dependent rect. 23 7
8 24.22 temperature 10.0 1440 > th dose independent rect. 13 6
12 24.22 temperature 10.0 1440 > th dose independent rect. 19 18
15 24.22 atmosphere 995.0 1440 > th dose independent rect. 19 18
16 24.23 radiation 20.0 14400 < th dose dependent rect. 19 9
17 24.26 wind 1.0 270 > th dose independent rect. 12 18
19 24.29 temperature 20.0 270 > th dose independent rect. 18 7
30 24.51 temperature 10.0 270 > th dose independent rect. 6 6
31 24.51 atmosphere 995.0 270 > th dose independent rect. 6 6
32 24.51 atmosphere 1015.0 270 < th dose independent rect. 6 6
33 24.51 temperature 10.0 270 > th dose independent rect. 12 18
35 24.53 precipitation 0.1 270 < th dose independent rect. 6 6
36 24.53 precipitation 0.1 270 < th dose dependent rect. 6 6
37 24.57 temperature 10.0 10 > th dose dependent rect. 22 14
38 24.60 humidity 50.0 270 > th dose independent rect. 6 6
39 24.60 wind 9.0 270 < th dose independent rect. 12 18
40 24.61 wind 9.0 270 < th dose independent rect. 6 6
41 24.65 radiation 1.0 30 > th dose independent rect. 12 19
44 24.67 wind 1.0 270 > th dose independent rect. 24 7
45 24.68 radiation 1.0 90 > th dose independent rect. 7 5
46 24.69 temperature 20.0 270 > th dose independent rect. 18 18
48 24.73 wind 5.0 270 < th dose independent rect. 17 9
53 24.74 radiation 1.0 1440 < th dose dependent rect. 19 9
54 24.75 temperature 10.0 1440 > th dose independent rect. 8 5
57 24.75 atmosphere 995.0 1440 > th dose independent rect. 8 5
61 24.75 temperature 10.0 1440 > th dose independent rect. 13 19
69 24.77 temperature 10.0 270 > th dose dependent rect. 18 17
73 24.79 radiation 20.0 14400 < th dose dependent rect. 19 7
74 24.83 temperature 20.0 90 > th dose independent rect. 21 15
76 24.84 wind 1.0 270 > th dose independent rect. 1 5
77 24.84 temperature 15.0 270 > th dose independent rect. 1 15
78 24.84 atmosphere 1015.0 270 < th dose independent rect. 7 16
79 24.84 precipitation 0.1 270 < th dose independent rect. 12 18
81 24.84 precipitation 0.1 270 < th dose dependent rect. 12 18
90 24.89 humidity 50.0 270 > th dose independent rect. 7 4
92 24.89 wind 1.0 270 > th dose independent rect. 11 20
101 24.90 humidity 60.0 30 > th dose independent rect. 18 9
106 24.91 temperature 10.0 1440 > th dose independent rect. 19 9
109 24.91 temperature 30.0 1440 < th dose independent rect. 19 9
113 24.91 humidity 50.0 1440 > th dose independent rect. 19 9
115 24.91 atmosphere 995.0 1440 > th dose independent rect. 19 9
116 24.91 radiation 1.0 1440 < th dose independent rect. 19 9
136 24.91 humidity 50.0 270 > th dose independent rect. 15 10
137 24.91 temperature 10.0 1440 > th dose independent rect. 4 15
145 24.92 wind 9.0 270 < th dose independent rect. 7 4
148 24.92 precipitation 0.1 270 < th dose independent rect. 16 9
149 24.92 precipitation 0.1 270 < th dose dependent rect. 16 9
155 24.94 radiation 1.0 30 < th dose dependent rect. 18 9
156 24.95 radiation 1.0 30 < th dose independent sin 14 NA
158 24.96 wind 1.0 90 > th dose independent rect. 7 5
160 24.97 wind 9.0 270 < th dose independent rect. 1 14
167 24.99 temperature 30.0 10 < th dose independent rect. 18 9
172 24.99 wind 1.0 90 > th dose dependent rect. 12 10
181 25.05 radiation 20.0 270 < th dose independent rect. 23 8
182 25.05 temperature 10.0 270 > th dose independent rect. 16 9
183 25.05 radiation 40.0 270 < th dose independent rect. 16 9
185 25.05 atmosphere 1015.0 270 < th dose independent rect. 1 15
188 25.06 atmosphere 995.0 270 > th dose independent rect. 12 18
190 25.06 radiation 40.0 270 < th dose dependent rect. 23 8
197 25.07 precipitation 0.1 270 < th dose independent rect. 7 16
200 25.07 precipitation 0.1 270 < th dose dependent rect. 7 16
204 25.08 humidity 70.0 270 > th dose independent rect. 23 8
205 25.08 radiation 1.0 30 < th dose independent rect. 18 9
214 25.09 wind 9.0 270 < th dose independent rect. 23 8
215 25.09 temperature 10.0 270 > th dose independent rect. 23 8
216 25.09 temperature 30.0 270 < th dose independent rect. 23 8
217 25.09 humidity 50.0 270 > th dose independent rect. 23 8
219 25.09 atmosphere 995.0 270 > th dose independent rect. 23 8
223 25.09 precipitation 0.1 270 < th dose independent rect. 1 15
224 25.09 temperature 10.0 270 > th dose independent rect. 7 16
228 25.09 precipitation 0.1 270 < th dose dependent rect. 1 15
239 25.11 precipitation 0.1 30 < th dose independent rect. 18 18
245 25.11 precipitation 0.1 30 < th dose dependent rect. 18 18
251 25.13 atmosphere 1010.0 30 < th dose independent rect. 12 6
255 25.14 atmosphere 1010.0 270 < th dose independent rect. 11 7
270 25.15 atmosphere 995.0 30 > th dose independent rect. 18 18
273 25.15 radiation 40.0 270 < th dose dependent rect. 16 9
275 25.16 wind 9.0 30 < th dose independent rect. 12 6
276 25.16 temperature 10.0 30 > th dose independent rect. 12 6
282 25.16 temperature 10.0 30 > th dose independent rect. 18 18
287 25.17 wind 1.0 30 > th dose independent rect. 12 6
290 25.17 precipitation 0.1 270 < th dose independent rect. 23 8
291 25.17 precipitation 0.1 270 < th dose independent rect. 18 17
292 25.17 precipitation 0.1 270 < th dose dependent rect. 23 8
293 25.17 precipitation 0.1 270 < th dose dependent rect. 18 17
308 25.20 radiation 1.0 10 > th dose independent rect. 7 7
309 25.20 wind 9.0 270 < th dose independent rect. 7 16
333 25.22 precipitation 0.1 30 < th dose independent rect. 12 6
341 25.22 precipitation 0.1 30 < th dose dependent rect. 12 6
344 25.23 atmosphere 995.0 270 > th dose independent rect. 16 9
345 25.23 atmosphere 995.0 270 > th dose independent rect. 1 14
354 25.25 temperature 15.0 270 > th dose independent rect. 11 7
361 25.26 radiation 1.0 1440 < th dose dependent rect. 19 7
362 25.27 atmosphere 1015.0 30 < th dose independent rect. 18 18
366 25.28 wind 9.0 30 < th dose independent rect. 18 18
372 25.29 atmosphere 1015.0 30 < th dose independent rect. 22 14
393 25.33 humidity 60.0 30 > th dose independent rect. 18 7
394 25.33 wind 7.0 270 < th dose independent rect. 18 17
395 25.33 atmosphere 995.0 270 > th dose independent rect. 18 17
399 25.34 temperature 10.0 270 > th dose independent rect. 18 17
402 25.34 radiation 20.0 270 < th dose dependent rect. 1 6
406 25.35 atmosphere 1015.0 270 < th dose independent rect. 18 18
411 25.35 wind 9.0 270 < th dose dependent rect. 16 9
419 25.36 humidity 50.0 270 > th dose independent rect. 18 17
423 25.36 radiation 1.0 30 < th dose dependent rect. 18 7
427 25.37 atmosphere 1000.0 30 > th dose independent rect. 12 6
434 25.38 precipitation 0.1 270 < th dose independent rect. 12 6
439 25.38 precipitation 0.1 270 < th dose dependent rect. 12 6
449 25.39 wind 1.0 30 > th dose independent rect. 12 10
452 25.40 radiation 1.0 30 > th dose independent sin 14 NA
455 25.40 wind 9.0 270 < th dose independent rect. 11 7
463 25.41 temperature 10.0 1440 > th dose independent rect. 19 7
466 25.41 temperature 30.0 30 < th dose independent rect. 18 7
467 25.41 temperature 30.0 1440 < th dose independent rect. 19 7
471 25.41 humidity 50.0 1440 > th dose independent rect. 19 7
473 25.41 atmosphere 995.0 1440 > th dose independent rect. 19 7
474 25.41 radiation 1.0 1440 < th dose independent rect. 19 7
495 25.41 temperature 10.0 1440 > th dose independent rect. 2 17
504 25.42 wind 1.0 270 > th dose independent rect. 7 16
507 25.42 atmosphere 1015.0 270 < th dose independent rect. 6 19
514 25.43 atmosphere 1010.0 10 < th dose independent rect. 12 10
516 25.43 precipitation 0.1 90 < th dose independent rect. 21 15
522 25.43 precipitation 0.1 90 < th dose dependent rect. 21 15
535 25.44 atmosphere 1015.0 270 < th dose independent rect. 24 7
545 25.44 atmosphere 995.0 30 > th dose dependent rect. 12 6
549 25.45 atmosphere 1010.0 90 < th dose independent rect. 12 9
557 25.46 precipitation 0.1 10 < th dose independent rect. 7 7
559 25.46 temperature 10.0 90 > th dose independent rect. 12 9
562 25.46 temperature 10.0 90 > th dose independent rect. 21 15
563 25.46 atmosphere 995.0 90 > th dose independent rect. 21 15
569 25.46 precipitation 0.1 10 < th dose dependent rect. 7 7
574 25.47 atmosphere 1015.0 270 < th dose independent rect. 16 9
575 25.47 radiation 40.0 10 < th dose independent rect. 14 17
583 25.48 temperature 10.0 10 > th dose independent rect. 7 7
585 25.48 atmosphere 995.0 10 > th dose independent rect. 7 7
586 25.48 atmosphere 1015.0 10 < th dose independent rect. 7 7
593 25.48 temperature 10.0 10 > th dose independent rect. 14 17
604 25.49 radiation 1.0 30 < th dose independent rect. 18 7
613 25.49 humidity 50.0 270 > th dose dependent rect. 7 4
621 25.50 temperature 10.0 10 > th dose independent rect. 12 10
624 25.50 temperature 10.0 10 > th dose independent rect. 22 14
625 25.50 atmosphere 995.0 10 > th dose independent rect. 22 14
627 25.50 wind 9.0 10 < th dose independent rect. 14 17
645 25.51 atmosphere 995.0 270 > th dose independent rect. 7 16
652 25.52 temperature 10.0 1440 > th dose independent rect. 13 10
655 25.52 temperature 10.0 1440 > th dose independent rect. 23 14
658 25.52 atmosphere 995.0 1440 > th dose independent rect. 23 14
659 25.52 wind 1.0 270 > th dose independent rect. 1 15
669 25.53 wind 9.0 30 < th dose independent rect. 3 15
674 25.54 atmosphere 1010.0 270 < th dose independent rect. 1 5
680 25.54 wind 1.0 90 > th dose dependent rect. 12 6
704 25.56 temperature 15.0 90 > th dose independent rect. 3 15
713 25.57 radiation 1.0 30 > th dose independent rect. 14 17
715 25.57 precipitation 0.1 270 < th dose independent rect. 6 19
720 25.57 precipitation 0.1 270 < th dose dependent rect. 6 19
735 25.58 wind 9.0 90 < th dose independent rect. 12 9
737 25.58 humidity 50.0 30 > th dose independent rect. 18 18
745 25.59 wind 9.0 270 < th dose independent rect. 1 5
746 25.59 temperature 10.0 270 > th dose independent rect. 1 5
748 25.59 temperature 30.0 270 < th dose independent rect. 1 5
749 25.59 humidity 50.0 270 > th dose independent rect. 1 5
752 25.59 atmosphere 995.0 270 > th dose independent rect. 1 5
761 25.59 precipitation 0.1 30 < th dose independent rect. 18 9
766 25.59 temperature 10.0 270 > th dose independent rect. 6 19
767 25.59 precipitation 0.1 30 < th dose dependent rect. 18 9
772 25.60 temperature 10.0 30 > th dose dependent rect. 12 6
780 25.61 wind 9.0 90 < th dose independent rect. 21 15
789 25.62 humidity 50.0 270 > th dose independent rect. 7 16
791 25.62 radiation 1.0 10 > th dose dependent rect. 7 5
807 25.64 precipitation 0.1 270 < th dose independent rect. 1 5
817 25.64 precipitation 0.1 90 < th dose independent rect. 12 9
824 25.64 precipitation 0.1 270 < th dose dependent rect. 1 5
828 25.64 precipitation 0.1 90 < th dose dependent rect. 12 9
830 25.65 temperature 10.0 1440 > th dose independent rect. 10 3
833 25.65 atmosphere 995.0 1440 > th dose independent rect. 10 3
838 25.65 temperature 10.0 1440 > th dose independent rect. 8 7
843 25.65 temperature 10.0 30 > th dose independent rect. 18 9
845 25.65 atmosphere 995.0 30 > th dose independent rect. 18 9
846 25.65 radiation 20.0 30 < th dose independent rect. 18 9
851 25.65 atmosphere 1015.0 30 < th dose independent rect. 3 15
852 25.65 temperature 10.0 1440 > th dose independent rect. 15 17
855 25.65 humidity 50.0 270 > th dose independent rect. 6 19
856 25.65 temperature 10.0 1440 > th dose independent rect. 13 21
866 25.66 wind 1.0 270 > th dose independent rect. 16 9
878 25.67 wind 1.0 30 > th dose independent rect. 9 3
879 25.67 radiation 1.0 30 > th dose independent rect. 9 3
884 25.67 wind 9.0 270 < th dose independent rect. 6 19
886 25.67 atmosphere 1000.0 30 > th dose independent rect. 12 21
898 25.68 wind 9.0 10 < th dose independent rect. 7 7
912 25.69 precipitation 0.1 30 < th dose independent rect. 3 15
916 25.69 atmosphere 995.0 270 > th dose dependent rect. 1 5
919 25.69 precipitation 0.1 30 < th dose dependent rect. 3 15
921 25.70 temperature 10.0 30 > th dose independent rect. 9 3
923 25.70 atmosphere 995.0 30 > th dose independent rect. 9 3
924 25.70 atmosphere 1015.0 30 < th dose independent rect. 9 3
925 25.70 precipitation 0.1 30 < th dose independent rect. 9 3
934 25.70 temperature 10.0 30 > th dose independent rect. 12 21
935 25.70 humidity 50.0 270 > th dose independent rect. 15 21
936 25.70 precipitation 0.1 30 < th dose dependent rect. 9 3
939 25.71 temperature 30.0 270 < th dose independent rect. 7 3
949 25.71 wind 1.0 10 > th dose independent rect. 7 7
952 25.71 atmosphere 1015.0 30 < th dose independent rect. 18 9