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Os04g0668000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.2 (0.0184) R2 : 0.661
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.27 (0.0461) R2dC : 0.569 R2C : 0.544
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.427 (0.0386) R2dN8 : 0.117 R2N8 : 0.0914
σ : 0.346
deviance : 54.85
__
_____
C
peak time of C : 20.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.62 0.331 8.21 -0.142 1.28 0.85 0.127 -2.93 -0.365 20.8 1005 17 -- --
51.84 0.338 8.2 -0.0454 1.27 0.43 0.167 -- -0.392 20.8 1005 17 -- --
49.67 0.328 8.21 -0.147 1.28 0.853 -- -2.95 -0.365 20.8 1005 17 -- --
51.78 0.337 8.19 -0.0441 1.26 0.413 -- -- -0.372 20.8 1006 15 -- --
139.48 0.55 8.14 -0.108 -- 0.726 -- -0.954 -0.283 -- 1010 284 -- --
54.74 0.347 8.2 -0.00849 1.27 -- 0.182 -- -0.429 20.7 -- -- -- --
54.84 0.347 8.2 -0.0142 1.27 -- -- -- -0.428 20.7 -- -- -- --
140.12 0.551 8.14 -0.0606 -- 0.697 -- -- -0.314 -- 1010 392 -- --
51.83 0.337 8.19 -- 1.26 0.408 -- -- -0.368 20.8 1006 15 -- --
146.3 0.565 8.17 -0.0169 -- -- -- -- -0.439 -- -- -- -- --
54.85 0.346 8.2 -- 1.27 -- -- -- -0.427 20.7 -- -- -- --
140.07 0.551 8.14 -- -- 0.594 -- -- -0.319 -- 1010 393 -- --
146.31 0.565 8.17 -- -- -- -- -- -0.437 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.57 temperature 20.0 30 > th dose independent rect. 23 5
2 44.63 temperature 20.0 30 > th dose dependent rect. 23 5
3 44.66 temperature 15.0 270 > th dose dependent rect. 21 5
5 44.70 temperature 20.0 270 > th dose independent rect. 21 5
9 44.82 temperature 20.0 270 > th dose dependent rect. 23 1
18 45.12 temperature 20.0 270 > th dose independent rect. 20 7
39 45.70 temperature 20.0 270 > th dose independent rect. 23 1
91 46.60 temperature 30.0 270 < th dose dependent rect. 1 6
122 47.21 temperature 10.0 270 > th dose dependent rect. 21 12
127 47.24 temperature 30.0 270 < th dose dependent rect. 16 15
134 47.31 atmosphere 1000.0 270 > th dose independent rect. 16 15
151 47.46 atmosphere 1015.0 90 < th dose dependent rect. 11 16
155 47.49 temperature 25.0 270 < th dose dependent rect. 23 8
162 47.53 temperature 20.0 270 > th dose independent rect. 20 13
167 47.55 atmosphere 995.0 10 > th dose dependent rect. 16 16
176 47.63 temperature 20.0 270 < th dose independent rect. 23 7
179 47.64 temperature 25.0 270 < th dose independent rect. 1 7
180 47.64 temperature 30.0 270 < th dose dependent rect. 3 2
186 47.66 humidity 50.0 720 > th dose dependent rect. 21 14
187 47.68 temperature 25.0 90 < th dose independent rect. 3 6
205 47.78 temperature 15.0 270 > th dose independent rect. 1 10
209 47.80 humidity 80.0 270 > th dose independent rect. 22 3
213 47.81 atmosphere 1015.0 10 < th dose dependent rect. 11 17
216 47.84 atmosphere 995.0 10 > th dose dependent rect. 14 18
228 47.91 temperature 30.0 10 < th dose dependent rect. 16 18
237 47.97 humidity 80.0 270 > th dose independent rect. 21 5
238 47.97 temperature 15.0 270 > th dose independent rect. 1 22
246 47.99 wind 7.0 270 < th dose dependent rect. 22 3
249 47.99 atmosphere 1015.0 10 < th dose dependent rect. 8 20
253 48.01 temperature 15.0 90 > th dose independent rect. 3 8
277 48.10 atmosphere 1000.0 10 > th dose independent rect. 16 16
280 48.11 temperature 25.0 270 < th dose independent rect. 17 15
291 48.13 wind 1.0 270 > th dose independent rect. 16 14
292 48.13 humidity 80.0 720 > th dose independent rect. 21 14
301 48.15 wind 5.0 270 < th dose independent rect. 22 3
302 48.15 temperature 25.0 270 < th dose independent rect. 13 19
311 48.18 humidity 80.0 90 > th dose independent rect. 21 7
326 48.22 radiation 20.0 270 < th dose independent rect. 16 14
327 48.22 temperature 15.0 270 > th dose independent rect. 2 19
331 48.23 atmosphere 995.0 270 > th dose dependent rect. 1 7
342 48.25 temperature 30.0 10 < th dose dependent rect. 4 6
344 48.26 temperature 20.0 270 > th dose independent rect. 21 16
347 48.27 atmosphere 1000.0 10 > th dose independent rect. 18 14
371 48.32 precipitation 0.1 270 < th dose independent rect. 16 14
376 48.32 precipitation 0.1 270 < th dose dependent rect. 16 14
386 48.35 atmosphere 1015.0 1440 < th dose independent rect. 24 4
390 48.36 humidity 80.0 720 > th dose independent sin 8 NA
391 48.36 atmosphere 1000.0 270 > th dose independent rect. 2 5
395 48.36 atmosphere 995.0 270 > th dose dependent rect. 14 17
396 48.37 temperature 25.0 270 < th dose independent sin 9 NA
397 48.37 atmosphere 1000.0 270 > th dose independent rect. 1 7
399 48.37 temperature 30.0 10 < th dose dependent rect. 4 4
402 48.38 atmosphere 1015.0 270 < th dose independent rect. 8 17
406 48.39 atmosphere 1000.0 30 > th dose dependent rect. 3 5
411 48.40 temperature 10.0 270 > th dose independent rect. 6 10
412 48.40 atmosphere 1015.0 270 < th dose independent rect. 6 10
413 48.40 temperature 10.0 270 > th dose independent rect. 16 14
420 48.41 wind 9.0 90 < th dose dependent rect. 15 12
428 48.43 atmosphere 995.0 270 > th dose dependent rect. 2 5
441 48.46 atmosphere 1015.0 270 < th dose independent rect. 7 19
444 48.46 wind 9.0 270 < th dose dependent rect. 13 12
446 48.46 atmosphere 995.0 90 > th dose dependent rect. 3 20
447 48.47 wind 9.0 270 < th dose independent rect. 16 14
473 48.51 humidity 80.0 14400 > th dose independent rect. 2 1
476 48.51 humidity 50.0 270 > th dose independent rect. 16 14
482 48.52 atmosphere 1000.0 270 > th dose independent rect. 3 3
484 48.52 atmosphere 1015.0 90 < th dose independent rect. 11 16
486 48.52 humidity 60.0 270 > th dose dependent rect. 22 3
489 48.52 atmosphere 995.0 90 > th dose dependent rect. 13 10
491 48.52 temperature 30.0 90 < th dose dependent rect. 13 21
499 48.54 wind 9.0 270 < th dose independent rect. 6 10
506 48.55 temperature 10.0 270 > th dose dependent sin 10 NA
511 48.55 humidity 90.0 720 < th dose dependent rect. 18 14
515 48.56 temperature 20.0 270 > th dose independent sin 12 NA
517 48.56 atmosphere 1015.0 270 < th dose independent rect. 21 4
525 48.56 humidity 50.0 720 > th dose dependent rect. 6 5
534 48.58 temperature 20.0 90 > th dose independent rect. 23 17
541 48.58 humidity 90.0 720 < th dose dependent rect. 18 16
547 48.60 temperature 25.0 270 < th dose independent rect. 3 2
548 48.60 humidity 50.0 270 > th dose independent rect. 6 10
549 48.60 precipitation 0.1 270 < th dose independent rect. 6 10
552 48.60 precipitation 0.1 270 < th dose dependent rect. 6 10
557 48.61 wind 9.0 90 < th dose dependent rect. 3 8
587 48.65 wind 5.0 270 < th dose independent rect. 12 14
600 48.66 precipitation 0.1 270 < th dose independent rect. 1 21
607 48.66 precipitation 0.1 270 < th dose dependent rect. 1 21
614 48.67 humidity 80.0 720 < th dose dependent rect. 19 12
616 48.68 atmosphere 1005.0 10 > th dose independent rect. 5 3
617 48.68 precipitation 0.1 90 < th dose independent rect. 3 8
618 48.68 humidity 80.0 1440 < th dose independent rect. 21 14
619 48.68 temperature 20.0 10 > th dose independent rect. 23 17
627 48.68 precipitation 0.1 90 < th dose dependent rect. 3 8
636 48.69 humidity 80.0 720 < th dose independent rect. 19 13
639 48.69 humidity 80.0 1440 < th dose independent rect. 19 16
669 48.71 radiation 40.0 270 < th dose dependent rect. 16 14
693 48.74 wind 1.0 270 > th dose independent rect. 6 10
707 48.75 humidity 50.0 720 > th dose dependent sin 7 NA
719 48.76 temperature 30.0 10 < th dose dependent rect. 14 20
722 48.77 wind 7.0 90 < th dose independent rect. 3 8
724 48.77 atmosphere 1015.0 10 < th dose independent rect. 8 20
726 48.77 humidity 60.0 90 > th dose dependent rect. 21 7
752 48.78 temperature 10.0 10 > th dose dependent rect. 8 20
767 48.80 atmosphere 1000.0 90 > th dose independent rect. 3 8
773 48.81 humidity 80.0 1440 < th dose independent sin 9 NA
775 48.81 humidity 50.0 43200 > th dose independent rect. 24 4
776 48.81 precipitation 0.1 270 < th dose independent rect. 2 5
783 48.81 precipitation 0.1 270 < th dose dependent rect. 2 5
793 48.82 atmosphere 995.0 270 > th dose independent rect. 1 20
799 48.83 temperature 20.0 10 > th dose independent rect. 8 20
806 48.84 wind 7.0 270 < th dose independent rect. 2 5
819 48.85 temperature 20.0 10 > th dose independent rect. 23 15
832 48.86 atmosphere 1015.0 270 < th dose independent rect. 23 1
834 48.86 wind 7.0 270 < th dose independent rect. 1 7
835 48.86 precipitation 0.1 270 < th dose independent rect. 1 7
839 48.86 precipitation 0.1 270 < th dose dependent rect. 1 7
847 48.87 precipitation 0.1 270 < th dose independent rect. 1 9
859 48.87 precipitation 0.1 270 < th dose dependent rect. 1 9
870 48.88 atmosphere 1015.0 90 < th dose independent rect. 3 8
871 48.88 wind 7.0 270 < th dose independent rect. 1 9
874 48.88 temperature 10.0 90 > th dose independent rect. 11 16
886 48.89 humidity 70.0 720 > th dose dependent sin 5 NA
903 48.91 temperature 10.0 270 > th dose independent rect. 2 5
906 48.91 humidity 50.0 270 > th dose independent rect. 2 5
909 48.91 atmosphere 1015.0 270 < th dose independent rect. 2 5
910 48.91 radiation 40.0 270 < th dose independent rect. 2 5
912 48.91 humidity 50.0 90 > th dose independent rect. 3 8
915 48.91 temperature 10.0 270 > th dose independent rect. 7 19
922 48.92 precipitation 0.1 270 < th dose independent rect. 22 3
930 48.92 precipitation 0.1 270 < th dose dependent rect. 22 3
945 48.93 radiation 10.0 43200 < th dose dependent rect. 24 4
948 48.93 humidity 90.0 1440 < th dose dependent rect. 22 13
951 48.93 atmosphere 995.0 90 > th dose dependent rect. 4 17
988 48.96 temperature 20.0 90 > th dose independent rect. 23 15