Os04g0667600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0667600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.47 | 0.469 | 11.1 | -1.29 | 0.226 | 1.3 | -0.434 | -5.37 | -0.205 | 14.7 | 26.2 | 4331 | -- | -- |
| 102.36 | 0.471 | 11.1 | -0.34 | 0.167 | 0.878 | -0.507 | -- | -0.253 | 13 | 17.78 | 7212 | -- | -- |
| 100 | 0.466 | 11.2 | -1.28 | 0.235 | 1.3 | -- | -5.37 | -0.203 | 15.4 | 26.3 | 4330 | -- | -- |
| 101.77 | 0.47 | 11.1 | -0.438 | 0.245 | 1.06 | -- | -- | -0.305 | 15.6 | 15.1 | 7155 | -- | -- |
| 102.79 | 0.472 | 11.1 | -1.29 | -- | 1.28 | -- | -5.38 | -0.206 | -- | 26.3 | 4439 | -- | -- |
| 122.46 | 0.519 | 11 | 0.159 | 0.186 | -- | -0.475 | -- | 0.0194 | 14.8 | -- | -- | -- | -- |
| 122.99 | 0.519 | 11 | 0.148 | 0.202 | -- | -- | -- | 0.0172 | 16 | -- | -- | -- | -- |
| 104.78 | 0.477 | 11.1 | -0.412 | -- | 1.03 | -- | -- | -0.286 | -- | 15.2 | 7387 | -- | -- |
| 104.61 | 0.476 | 11 | -- | 0.216 | 0.731 | -- | -- | -0.176 | 15.1 | 18.83 | 7117 | -- | -- |
| 125.21 | 0.523 | 11 | 0.14 | -- | -- | -- | -- | 0.0118 | -- | -- | -- | -- | -- |
| 123.57 | 0.52 | 11 | -- | 0.199 | -- | -- | -- | 0.000744 | 16.1 | -- | -- | -- | -- |
| 107.49 | 0.483 | 11 | -- | -- | 0.732 | -- | -- | -0.161 | -- | 18.5 | 6129 | -- | -- |
| 125.72 | 0.523 | 11 | -- | -- | -- | -- | -- | -0.00366 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 10 | 97.63 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 6 |
| 12 | 97.65 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 53 | 98.21 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 65 | 98.38 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 125 | 99.04 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 127 | 99.05 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 166 | 99.36 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 185 | 99.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 192 | 99.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 197 | 99.58 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 206 | 99.61 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 9 |
| 208 | 99.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 255 | 99.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 307 | 99.85 | temperature | 20 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 312 | 99.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 346 | 99.91 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 405 | 99.98 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 440 | 100.03 | humidity | 90 | 43200 | > th | dose dependent | sin | 20 | NA |
| 453 | 100.06 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 460 | 100.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 461 | 100.07 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 473 | 100.09 | humidity | 90 | 43200 | > th | dose independent | sin | 20 | NA |
| 505 | 100.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 509 | 100.13 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 511 | 100.14 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 520 | 100.14 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 528 | 100.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 531 | 100.16 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 549 | 100.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 574 | 100.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 593 | 100.21 | temperature | 20 | 14400 | > th | dose dependent | sin | 19 | NA |
| 601 | 100.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 621 | 100.24 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 637 | 100.26 | temperature | 25 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 644 | 100.27 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 769 | 100.37 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 781 | 100.38 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 803 | 100.39 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 9 |
| 804 | 100.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 10 |
| 878 | 100.44 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 899 | 100.45 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 921 | 100.46 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 979 | 100.49 | humidity | 90 | 43200 | < th | dose independent | sin | 20 | NA |