Os04g0667300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fe2+ dioxygenase-like.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0667300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Fe2+ dioxygenase-like.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.61 | 0.628 | 3.98 | 0.0283 | 1.07 | 1.48 | -1.02 | -0.81 | 0.0955 | 18.6 | 23.72 | 904 | -- | -- |
| 179 | 0.623 | 3.99 | -0.071 | 1.05 | 1.67 | -0.97 | -- | 0.0647 | 18.6 | 23.05 | 935 | -- | -- |
| 180.81 | 0.626 | 3.99 | 0.0213 | 1.06 | 1.58 | -- | -0.537 | 0.0801 | 18.6 | 23.29 | 950 | -- | -- |
| 181.07 | 0.627 | 4 | -0.0587 | 1.06 | 1.68 | -- | -- | 0.062 | 18.6 | 23.1 | 948 | -- | -- |
| 235.22 | 0.714 | 3.96 | 0.027 | -- | 1.57 | -- | -0.653 | 0.0731 | -- | 23.6 | 1184 | -- | -- |
| 213.37 | 0.685 | 4.06 | -0.529 | 1.04 | -- | -1.02 | -- | -0.215 | 18 | -- | -- | -- | -- |
| 215.92 | 0.688 | 4.06 | -0.521 | 1.03 | -- | -- | -- | -0.219 | 18 | -- | -- | -- | -- |
| 235.64 | 0.715 | 3.98 | -0.0674 | -- | 1.7 | -- | -- | 0.0492 | -- | 23.26 | 1179 | -- | -- |
| 181.16 | 0.627 | 4 | -- | 1.06 | 1.71 | -- | -- | 0.0673 | 18.6 | 23.1 | 948 | -- | -- |
| 270.91 | 0.769 | 4.04 | -0.551 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 223.07 | 0.699 | 4.05 | -- | 1.04 | -- | -- | -- | -0.161 | 18 | -- | -- | -- | -- |
| 235.74 | 0.715 | 3.97 | -- | -- | 1.74 | -- | -- | 0.0608 | -- | 23.24 | 1181 | -- | -- |
| 278.92 | 0.78 | 4.03 | -- | -- | -- | -- | -- | -0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 5 | 169.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 31 | 171.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 36 | 172.17 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 41 | 172.43 | temperature | 15 | 270 | > th | dose dependent | sin | 4 | NA |
| 53 | 172.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 76 | 173.25 | temperature | 25 | 720 | < th | dose dependent | sin | 4 | NA |
| 111 | 173.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 131 | 174.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 7 |
| 139 | 174.26 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 164 | 174.53 | temperature | 20 | 10 | > th | dose dependent | sin | 0 | NA |
| 187 | 174.82 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 191 | 174.84 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 208 | 175.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 260 | 175.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 283 | 175.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 304 | 175.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 428 | 177.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 438 | 177.15 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 445 | 177.23 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 550 | 178.11 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 15 |
| 608 | 178.61 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 640 | 178.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 641 | 178.78 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 711 | 179.22 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 3 |
| 843 | 180.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 866 | 180.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 960 | 180.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |