Os04g0664900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 32 protein.
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Os04g0664900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 32 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.47 | 0.503 | 3.09 | 0.46 | 0.145 | -0.894 | 0.548 | -1.57 | 0.0805 | 22.8 | 68.18 | 4908 | -- | -- |
| 117.98 | 0.506 | 3.08 | 0.515 | 0.143 | -1.04 | 0.453 | -- | 0.179 | 22.8 | 70 | 4893 | -- | -- |
| 115.72 | 0.501 | 3.09 | 0.442 | 0.14 | -0.89 | -- | -1.51 | 0.0794 | 22.7 | 68 | 4904 | -- | -- |
| 116.08 | 0.502 | 3.03 | 0.383 | 0.138 | -1.03 | -- | -- | 0.312 | 22.9 | 73 | 7901 | -- | -- |
| 116.47 | 0.503 | 3.09 | 0.461 | -- | -0.908 | -- | -1.55 | 0.0752 | -- | 68 | 4602 | -- | -- |
| 134.55 | 0.544 | 3.1 | 0.524 | 0.114 | -- | 0.42 | -- | 0.051 | 1.03 | -- | -- | -- | -- |
| 135.25 | 0.545 | 3.1 | 0.508 | 0.117 | -- | -- | -- | 0.0482 | 1.93 | -- | -- | -- | -- |
| 117.47 | 0.505 | 3.04 | 0.401 | -- | -1.01 | -- | -- | 0.307 | -- | 73 | 7685 | -- | -- |
| 119.73 | 0.51 | 3.05 | -- | 0.187 | -1.11 | -- | -- | 0.291 | 22.9 | 73 | 7938 | -- | -- |
| 136.08 | 0.545 | 3.1 | 0.513 | -- | -- | -- | -- | 0.051 | -- | -- | -- | -- | -- |
| 142.06 | 0.558 | 3.11 | -- | 0.127 | -- | -- | -- | -0.00837 | 2.04 | -- | -- | -- | -- |
| 121.56 | 0.514 | 3.05 | -- | -- | -1.07 | -- | -- | 0.274 | -- | 72.85 | 7738 | -- | -- |
| 143.03 | 0.558 | 3.11 | -- | -- | -- | -- | -- | -0.00597 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.17 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 2 | 110.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 3 | 110.46 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 5 | 110.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 6 | 110.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 12 |
| 7 | 110.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 19 | 110.71 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 21 | 110.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 22 | 110.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 72 | 111.28 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 85 | 111.37 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 14 | NA |
| 86 | 111.37 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 14 | NA |
| 87 | 111.37 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 14 | NA |
| 113 | 111.53 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 137 | 111.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 150 | 111.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 152 | 111.72 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 164 | 111.76 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 184 | 111.83 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 231 | 111.98 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 233 | 111.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 272 | 112.09 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 15 |
| 310 | 112.19 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 13 | NA |
| 405 | 112.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 413 | 112.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 422 | 112.42 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 439 | 112.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 440 | 112.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 446 | 112.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 493 | 112.51 | humidity | 80.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 512 | 112.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 523 | 112.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 602 | 112.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 629 | 112.63 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 738 | 112.72 | humidity | 80.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 747 | 112.72 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 782 | 112.75 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 19 | NA |
| 811 | 112.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 22 |
| 818 | 112.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 22 |
| 823 | 112.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 934 | 112.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 997 | 112.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |