Os04g0664800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell wall invertase (EC 3.2.1.26).
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Os04g0664800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell wall invertase (EC 3.2.1.26).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 263.98 | 0.763 | 4.05 | 0.00529 | 0.53 | 1.3 | 0.0935 | 0.51 | -0.246 | 10.1 | 22.3 | 1503 | -- | -- |
| 264.6 | 0.758 | 4.03 | 0.176 | 0.529 | 1.29 | 0.0969 | -- | -0.205 | 10.1 | 22.29 | 1505 | -- | -- |
| 264.01 | 0.757 | 4.05 | 0.00811 | 0.53 | 1.3 | -- | 0.513 | -0.246 | 10.2 | 22.3 | 1505 | -- | -- |
| 264.63 | 0.758 | 4.03 | 0.178 | 0.529 | 1.29 | -- | -- | -0.204 | 10.2 | 22.29 | 1510 | -- | -- |
| 270 | 0.765 | 4.08 | -0.131 | -- | 1.26 | -- | 0.764 | -0.278 | -- | 22.21 | 844 | -- | -- |
| 327.37 | 0.848 | 4.13 | -0.291 | 0.54 | -- | 0.00992 | -- | -0.642 | 10.5 | -- | -- | -- | -- |
| 327.37 | 0.847 | 4.13 | -0.29 | 0.54 | -- | -- | -- | -0.641 | 10.5 | -- | -- | -- | -- |
| 271.87 | 0.768 | 4.05 | 0.138 | -- | 1.27 | -- | -- | -0.207 | -- | 22.29 | 844 | -- | -- |
| 265.37 | 0.759 | 4.04 | -- | 0.528 | 1.23 | -- | -- | -0.233 | 10.1 | 22.3 | 1503 | -- | -- |
| 345.24 | 0.868 | 4.15 | -0.3 | -- | -- | -- | -- | -0.644 | -- | -- | -- | -- | -- |
| 329.59 | 0.849 | 4.13 | -- | 0.542 | -- | -- | -- | -0.609 | 10.5 | -- | -- | -- | -- |
| 272.05 | 0.768 | 4.05 | -- | -- | 1.22 | -- | -- | -0.233 | -- | 22.38 | 859 | -- | -- |
| 347.6 | 0.87 | 4.14 | -- | -- | -- | -- | -- | -0.61 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 2 | 263.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 38 | 265.17 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 84 | 266.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 85 | 266.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 267.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 113 | 267.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 116 | 267.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 134 | 267.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 143 | 267.62 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 167 | 267.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 231 | 268.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 343 | 269.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 441 | 270.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 667 | 271.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 742 | 272.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 969 | 273.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |