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Os04g0663500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.47 (0.0354) R2 : 0.422
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.16 (0.121) R2dC : 0.704 R2C : 0.2
β3 : 1.02 (0.103) R2dE : 0.218 R2E : -0.28
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0748 (0.0745) R2dN8 : 0.00128 R2N8 : -0.000567
σ : 0.663
deviance : 202.52
__
_____
C
peak time of C : 17.9
E
wheather : temperature
threshold : 19.49
memory length : 232
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19.4
open length of G : 17.7

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
198.32 0.662 6.47 0.357 2.13 0.988 0.687 -0.0015 0.0935 17.9 19.41 230 19.3 18
198.16 0.656 6.47 0.365 2.16 0.987 0.687 -- 0.0874 17.9 19.46 232 19.5 17.7
199.13 0.657 6.47 0.346 2.14 0.966 -- -0.208 0.0965 17.9 19.48 232 19.4 17.7
199.29 0.657 6.46 0.351 2.16 0.99 -- -- 0.1 17.9 19.49 232 19.4 17.7
276.82 0.775 6.39 0.685 -- 1.19 -- -0.691 0.312 -- 4.362 995 22.5 17
236.06 0.72 6.43 0.605 1.42 -- 0.452 -- 0.187 17.4 -- -- -- --
236.57 0.72 6.42 0.604 1.42 -- -- -- 0.189 17.4 -- -- -- --
217.24 0.686 6.37 0.645 -- 1.35 -- -- 0.265 -- 7.378 505 4.37 18.7
202.52 0.663 6.47 -- 2.16 1.02 -- -- 0.0748 17.9 19.49 232 19.4 17.7
341.29 0.863 6.41 0.556 -- -- -- -- 0.154 -- -- -- -- --
246.19 0.734 6.44 -- 1.41 -- -- -- 0.121 17.4 -- -- -- --
227.74 0.703 6.39 -- -- 1.34 -- -- 0.173 -- 7.423 492 4.48 18.7
349.46 0.873 6.42 -- -- -- -- -- 0.0919 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 200.90 temperature 10.0 90 > th dose dependent rect. 8 7
3 201.28 temperature 20.0 270 > th dose independent rect. 19 18
4 201.62 temperature 10.0 10 > th dose dependent rect. 9 7
19 202.91 temperature 10.0 270 > th dose dependent rect. 20 16
30 204.07 temperature 10.0 10 > th dose dependent rect. 9 17
37 204.50 temperature 10.0 10 > th dose dependent rect. 9 19
38 204.52 temperature 20.0 90 > th dose independent rect. 8 7
41 204.96 temperature 10.0 43200 > th dose independent rect. 10 6
43 205.06 humidity 90.0 90 < th dose independent rect. 8 7
46 205.21 temperature 15.0 270 > th dose independent rect. 8 17
47 205.22 wind 9.0 270 < th dose dependent rect. 7 7
54 205.52 temperature 10.0 270 > th dose dependent rect. 6 7
56 205.61 humidity 90.0 10 < th dose independent rect. 9 7
58 205.64 humidity 90.0 90 < th dose dependent rect. 2 6
60 205.69 temperature 15.0 270 > th dose dependent rect. 9 1
63 205.75 temperature 20.0 10 > th dose independent rect. 9 7
92 206.69 wind 9.0 270 < th dose dependent rect. 8 17
103 206.98 wind 5.0 270 < th dose independent rect. 1 7
111 207.10 temperature 15.0 270 > th dose independent rect. 6 8
113 207.12 wind 9.0 10 < th dose independent rect. 9 7
117 207.18 precipitation 0.1 10 < th dose independent rect. 16 17
118 207.18 precipitation 0.1 10 < th dose dependent rect. 16 17
122 207.22 precipitation 0.1 270 < th dose independent rect. 1 7
123 207.22 precipitation 0.1 270 < th dose dependent rect. 1 7
129 207.31 radiation 1.0 10 > th dose dependent rect. 16 17
135 207.40 radiation 30.0 90 < th dose independent rect. 3 6
140 207.50 temperature 15.0 270 > th dose independent rect. 6 21
141 207.51 wind 9.0 90 < th dose independent rect. 8 7
148 207.59 precipitation 0.1 90 < th dose independent rect. 3 6
150 207.59 precipitation 0.1 90 < th dose dependent rect. 3 6
151 207.66 precipitation 0.1 90 < th dose independent rect. 8 7
152 207.66 precipitation 0.1 90 < th dose dependent rect. 8 7
159 207.72 radiation 30.0 90 < th dose independent rect. 15 18
169 207.84 wind 9.0 270 < th dose dependent rect. 7 19
175 207.94 temperature 30.0 90 < th dose independent rect. 3 6
180 207.96 precipitation 0.1 270 < th dose independent rect. 3 3
181 207.96 precipitation 0.1 270 < th dose dependent rect. 3 3
183 207.97 atmosphere 1015.0 30 < th dose dependent rect. 4 5
185 207.98 temperature 15.0 270 > th dose independent rect. 5 23
189 207.99 atmosphere 1015.0 90 < th dose independent rect. 8 7
190 207.99 temperature 10.0 90 > th dose independent rect. 15 17
195 208.04 wind 5.0 270 < th dose independent rect. 8 17
196 208.05 wind 9.0 10 < th dose independent rect. 16 17
198 208.08 wind 5.0 90 < th dose independent rect. 3 6
199 208.08 temperature 10.0 10 > th dose independent rect. 9 7
201 208.08 atmosphere 1015.0 10 < th dose independent rect. 9 7
202 208.08 precipitation 0.1 10 < th dose independent rect. 9 7
203 208.08 temperature 10.0 10 > th dose independent rect. 16 17
204 208.08 precipitation 0.1 10 < th dose dependent rect. 9 7
211 208.11 precipitation 0.1 90 < th dose independent rect. 15 17
213 208.11 precipitation 0.1 90 < th dose dependent rect. 15 17
218 208.15 radiation 1.0 270 < th dose dependent rect. 5 22
221 208.30 atmosphere 1015.0 270 < th dose dependent rect. 4 1
222 208.31 wind 9.0 90 < th dose independent rect. 15 17
225 208.33 atmosphere 995.0 90 > th dose independent rect. 8 7
227 208.34 wind 5.0 270 < th dose independent rect. 3 3
241 208.47 wind 7.0 270 < th dose independent rect. 6 8
242 208.48 radiation 30.0 270 < th dose independent rect. 1 8
243 208.49 atmosphere 1015.0 270 < th dose dependent rect. 3 3
244 208.50 wind 5.0 270 < th dose independent rect. 8 5
245 208.51 wind 9.0 90 < th dose independent rect. 9 18
246 208.53 atmosphere 995.0 10 > th dose independent rect. 9 7
251 208.59 radiation 1.0 10 > th dose independent rect. 9 7
253 208.61 precipitation 0.1 10 < th dose independent rect. 2 7
254 208.61 precipitation 0.1 10 < th dose dependent rect. 2 7
257 208.64 atmosphere 995.0 10 > th dose independent rect. 16 17
261 208.69 humidity 50.0 270 > th dose dependent rect. 18 8
272 208.78 humidity 60.0 90 > th dose independent rect. 3 6
277 208.82 humidity 90.0 10 < th dose independent rect. 2 7
278 208.82 atmosphere 995.0 90 > th dose independent rect. 15 17
314 209.00 temperature 10.0 90 > th dose independent rect. 3 6
317 209.00 atmosphere 995.0 90 > th dose independent rect. 3 6
318 209.00 atmosphere 1015.0 90 < th dose independent rect. 3 6
319 209.00 temperature 10.0 270 > th dose independent rect. 1 7
321 209.00 temperature 30.0 270 < th dose independent rect. 1 7
322 209.00 humidity 50.0 270 > th dose independent rect. 1 7
324 209.00 atmosphere 995.0 270 > th dose independent rect. 1 7
325 209.00 atmosphere 1015.0 270 < th dose independent rect. 1 7
336 209.08 temperature 15.0 10 > th dose independent rect. 9 19
345 209.11 wind 5.0 270 < th dose independent rect. 9 1
354 209.16 wind 9.0 270 < th dose dependent rect. 9 1
372 209.25 temperature 25.0 270 < th dose independent rect. 4 1
376 209.26 temperature 20.0 10 > th dose independent rect. 20 19
382 209.29 radiation 1.0 30 > th dose independent rect. 18 15
384 209.30 precipitation 0.1 10 < th dose independent rect. 4 5
385 209.30 precipitation 0.1 10 < th dose dependent rect. 4 5
386 209.31 radiation 1.0 270 < th dose dependent rect. 11 16
393 209.35 wind 9.0 10 < th dose independent rect. 9 19
411 209.44 temperature 30.0 270 < th dose dependent rect. 3 2
432 209.51 precipitation 0.1 270 < th dose independent rect. 3 15
434 209.51 precipitation 0.1 270 < th dose dependent rect. 3 15
447 209.55 wind 7.0 10 < th dose independent rect. 4 5
451 209.55 humidity 90.0 10 < th dose dependent rect. 3 6
456 209.57 radiation 1.0 30 > th dose independent rect. 5 4
489 209.65 temperature 10.0 1440 > th dose independent rect. 10 6
492 209.65 temperature 10.0 1440 > th dose independent rect. 16 18
500 209.67 temperature 10.0 10 > th dose independent rect. 4 5
502 209.67 temperature 30.0 10 < th dose independent rect. 4 5
503 209.67 humidity 50.0 10 > th dose independent rect. 4 5
505 209.67 atmosphere 995.0 10 > th dose independent rect. 4 5
506 209.67 atmosphere 1015.0 10 < th dose independent rect. 4 5
511 209.69 precipitation 0.1 270 < th dose independent rect. 8 17
514 209.69 precipitation 0.1 270 < th dose dependent rect. 8 17
521 209.73 wind 5.0 270 < th dose independent rect. 4 1
524 209.74 temperature 20.0 270 > th dose independent rect. 9 1
547 209.75 radiation 1.0 270 < th dose dependent rect. 18 9
554 209.78 temperature 15.0 270 > th dose independent rect. 18 9
558 209.80 wind 9.0 90 < th dose dependent rect. 3 6
560 209.81 precipitation 0.1 270 < th dose independent rect. 6 8
561 209.81 precipitation 0.1 270 < th dose dependent rect. 6 8
562 209.82 temperature 20.0 10 > th dose independent rect. 22 16
565 209.83 precipitation 0.1 270 < th dose independent rect. 4 1
567 209.83 precipitation 0.1 270 < th dose dependent rect. 4 1
582 209.90 radiation 20.0 4320 > th dose dependent rect. 6 2
608 209.94 humidity 60.0 270 > th dose independent rect. 18 9
610 209.94 wind 9.0 270 < th dose independent rect. 6 21
612 209.96 radiation 1.0 10 > th dose dependent rect. 18 15
617 209.98 radiation 1.0 270 < th dose independent rect. 18 9
619 209.99 radiation 40.0 10 < th dose independent rect. 16 17
622 210.00 temperature 30.0 270 < th dose independent rect. 18 9
623 210.00 wind 9.0 270 < th dose dependent rect. 3 3
627 210.01 radiation 1.0 10 > th dose dependent rect. 5 4
630 210.01 temperature 30.0 270 < th dose dependent rect. 1 7
641 210.03 humidity 90.0 720 < th dose dependent rect. 18 14
642 210.04 atmosphere 1000.0 10 > th dose dependent rect. 2 7
644 210.05 wind 1.0 90 > th dose independent rect. 8 7
645 210.05 wind 1.0 270 > th dose independent rect. 14 16
646 210.05 wind 9.0 270 < th dose dependent rect. 4 1
647 210.05 wind 1.0 43200 > th dose dependent rect. 23 6
661 210.12 wind 1.0 270 < th dose independent rect. 3 2
677 210.19 temperature 10.0 270 > th dose independent rect. 3 3
679 210.19 temperature 30.0 270 < th dose independent rect. 3 3
680 210.19 humidity 50.0 270 > th dose independent rect. 3 3
683 210.19 atmosphere 995.0 270 > th dose independent rect. 3 3
684 210.19 atmosphere 1015.0 270 < th dose independent rect. 3 3
685 210.19 radiation 20.0 270 < th dose independent rect. 3 3
693 210.19 atmosphere 995.0 270 > th dose independent rect. 6 8
694 210.19 atmosphere 1015.0 270 < th dose independent rect. 6 8
712 210.26 wind 1.0 43200 > th dose dependent rect. 1 3
713 210.27 radiation 40.0 10 < th dose independent rect. 4 16
721 210.29 wind 9.0 10 < th dose independent rect. 9 17
726 210.31 humidity 80.0 720 < th dose dependent rect. 20 1
745 210.38 radiation 40.0 90 < th dose independent rect. 4 15
760 210.43 atmosphere 995.0 270 > th dose independent rect. 18 9
771 210.47 radiation 20.0 270 < th dose independent rect. 18 9
774 210.47 temperature 10.0 270 > th dose independent rect. 3 15
775 210.47 atmosphere 1015.0 270 < th dose independent rect. 3 15
781 210.49 radiation 1.0 1440 > th dose independent rect. 8 2
801 210.55 radiation 20.0 1440 < th dose dependent rect. 11 2
807 210.58 radiation 40.0 270 < th dose dependent rect. 3 3
817 210.61 wind 9.0 270 < th dose independent rect. 18 9
818 210.61 precipitation 0.1 10 < th dose independent rect. 9 17
822 210.61 precipitation 0.1 10 < th dose dependent rect. 9 17
853 210.72 wind 9.0 1440 < th dose independent rect. 5 5
869 210.75 wind 9.0 43200 < th dose dependent rect. 23 6
873 210.76 humidity 50.0 10 > th dose independent rect. 16 17
882 210.78 atmosphere 1015.0 1440 < th dose independent rect. 3 7
883 210.78 wind 5.0 43200 < th dose dependent rect. 1 3
887 210.79 radiation 1.0 270 < th dose dependent rect. 4 1
895 210.81 radiation 1.0 30 > th dose independent rect. 16 17
898 210.82 temperature 10.0 10 > th dose dependent rect. 4 5
932 210.86 wind 9.0 270 < th dose independent rect. 5 23
935 210.87 radiation 1.0 270 > th dose independent rect. 9 1
948 210.89 temperature 10.0 1440 > th dose independent rect. 3 7
955 210.89 atmosphere 995.0 1440 > th dose independent rect. 3 7
959 210.89 temperature 10.0 1440 > th dose independent rect. 10 17
970 210.91 temperature 10.0 270 > th dose independent rect. 4 1
973 210.91 humidity 50.0 270 > th dose independent rect. 4 1
976 210.91 atmosphere 995.0 270 > th dose independent rect. 4 1
977 210.91 atmosphere 1010.0 270 < th dose independent rect. 4 1
979 210.91 radiation 20.0 270 < th dose independent rect. 4 1
991 210.93 radiation 40.0 270 < th dose dependent rect. 1 7
997 210.95 radiation 40.0 270 < th dose dependent rect. 4 1