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Os04g0662800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0134) R2 : 0.397
β1 : -0.821 (0.049) R2dD : 0.386 R2D : 0.299
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.212 (0.0285) R2dN8 : 0.0982 R2N8 : 0.0108
σ : 0.251
deviance : 28.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.1 0.226 11.4 -0.819 0.257 0.51 -0.34 0.0308 -0.199 16.5 47.9 10 -- --
23.01 0.225 11.4 -0.819 0.256 0.524 -0.362 -- -0.199 16.4 47 10 -- --
23.24 0.226 11.4 -0.826 0.256 0.517 -- 0.225 -0.201 16.6 47.27 10 -- --
23.35 0.227 11.4 -0.821 0.255 0.544 -- -- -0.201 16.6 45.37 3 -- --
25.36 0.236 11.4 -0.831 -- 0.313 -- 0.219 -0.21 -- 47.27 10 -- --
26.96 0.243 11.4 -0.814 0.159 -- 0.274 -- -0.213 23.2 -- -- -- --
27.23 0.244 11.4 -0.824 0.162 -- -- -- -0.213 22.4 -- -- -- --
25.44 0.236 11.4 -0.826 -- 0.365 -- -- -0.21 -- 37.11 4 -- --
41.01 0.3 11.4 -- 0.277 0.609 -- -- -0.111 16.5 40 13 -- --
28.83 0.251 11.4 -0.821 -- -- -- -- -0.212 -- -- -- -- --
45.11 0.314 11.4 -- 0.158 -- -- -- -0.121 22 -- -- -- --
43.42 0.308 11.4 -- -- 0.355 -- -- -0.118 -- 37.11 4 -- --
46.62 0.319 11.4 -- -- -- -- -- -0.121 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.55 humidity 60 270 > th dose independent rect. 24 15
2 21.93 temperature 15 30 > th dose dependent rect. 6 19
5 22.04 temperature 25 10 > th dose independent rect. 5 7
12 22.23 temperature 30 30 < th dose independent rect. 12 18
15 22.38 humidity 60 90 > th dose independent rect. 11 19
16 22.40 temperature 30 10 < th dose dependent rect. 1 17
18 22.42 temperature 15 30 > th dose dependent rect. 6 21
22 22.46 humidity 90 10 < th dose dependent sin 8 NA
24 22.47 humidity 90 10 < th dose dependent rect. 15 23
25 22.48 humidity 60 270 > th dose independent rect. 10 6
27 22.48 temperature 20 10 > th dose dependent rect. 5 7
29 22.50 humidity 50 10 > th dose dependent rect. 21 23
34 22.53 temperature 25 10 > th dose independent rect. 24 12
42 22.56 temperature 15 30 > th dose dependent rect. 6 15
55 22.61 temperature 20 10 > th dose dependent sin 5 NA
59 22.62 temperature 20 10 > th dose dependent rect. 24 12
60 22.63 radiation 40 30 < th dose dependent sin 9 NA
73 22.68 temperature 10 10 > th dose dependent rect. 15 23
83 22.71 temperature 20 10 > th dose dependent rect. 15 23
87 22.72 humidity 50 10 > th dose dependent rect. 1 23
88 22.73 temperature 25 10 > th dose dependent sin 8 NA
100 22.76 temperature 30 10 < th dose dependent rect. 3 15
103 22.77 temperature 10 10 > th dose dependent sin 4 NA
115 22.80 humidity 50 10 > th dose dependent sin 8 NA
143 22.86 humidity 90 30 < th dose independent rect. 6 19
146 22.86 humidity 50 10 > th dose dependent rect. 7 23
155 22.88 temperature 30 10 < th dose dependent sin 4 NA
158 22.88 humidity 50 10 > th dose dependent rect. 1 16
165 22.89 radiation 1 30 > th dose dependent sin 9 NA
172 22.90 humidity 50 10 > th dose dependent rect. 12 18
189 22.92 humidity 50 10 > th dose dependent rect. 10 20
201 22.93 humidity 90 10 < th dose dependent rect. 18 18
208 22.94 humidity 90 1440 < th dose dependent rect. 8 5
209 22.94 humidity 80 1440 < th dose dependent rect. 6 7
276 23.01 humidity 90 1440 < th dose dependent rect. 11 2
277 23.01 humidity 90 10 < th dose dependent rect. 23 13
286 23.02 humidity 50 1440 > th dose dependent rect. 8 6
292 23.02 humidity 90 10 < th dose dependent rect. 20 16
296 23.02 humidity 90 10 < th dose dependent rect. 17 21
297 23.03 temperature 25 10 > th dose independent rect. 20 16
304 23.04 temperature 30 30 < th dose independent rect. 1 17
335 23.06 temperature 20 10 > th dose dependent rect. 20 16
345 23.07 humidity 50 1440 > th dose dependent rect. 11 2
347 23.07 humidity 90 10 < th dose dependent rect. 6 6
351 23.07 humidity 90 10 < th dose dependent rect. 6 19
356 23.08 temperature 30 270 < th dose independent rect. 24 15
363 23.08 temperature 20 10 > th dose dependent rect. 2 10
369 23.08 humidity 90 10 < th dose dependent rect. 15 21
376 23.10 humidity 90 30 < th dose independent rect. 18 18
388 23.11 humidity 50 10 > th dose dependent no NA NA
395 23.11 humidity 90 10 < th dose dependent rect. 13 23
404 23.13 humidity 90 10 < th dose independent rect. 6 6
458 23.17 humidity 60 10 > th dose dependent rect. 21 21
472 23.19 temperature 25 10 > th dose independent sin 4 NA
521 23.22 humidity 50 10 > th dose dependent rect. 19 23
529 23.23 temperature 20 10 > th dose dependent rect. 13 23
577 23.27 humidity 70 1440 < th dose dependent sin 7 NA
611 23.29 temperature 25 10 > th dose independent rect. 5 20
621 23.29 temperature 20 10 > th dose dependent rect. 15 21
628 23.30 humidity 60 720 > th dose independent rect. 3 10
657 23.30 temperature 25 10 > th dose dependent rect. 17 23
673 23.32 temperature 25 10 > th dose independent rect. 17 19
682 23.32 temperature 20 10 > th dose dependent rect. 18 18
687 23.33 temperature 25 10 > th dose independent rect. 5 16
699 23.34 humidity 60 1440 > th dose independent sin 7 NA
700 23.34 humidity 80 1440 < th dose independent rect. 7 7
728 23.35 humidity 60 1440 > th dose independent rect. 8 6
729 23.35 humidity 60 1440 > th dose independent rect. 6 8
733 23.35 humidity 60 1440 > th dose independent rect. 22 15
781 23.37 temperature 30 270 < th dose independent rect. 10 7
783 23.37 temperature 25 10 < th dose independent rect. 3 15
785 23.37 humidity 90 30 < th dose independent rect. 20 16
800 23.38 wind 7 4320 < th dose independent rect. 17 1
803 23.38 radiation 1 90 > th dose independent rect. 17 19
823 23.39 humidity 80 1440 > th dose independent rect. 7 7
834 23.39 temperature 20 270 > th dose dependent rect. 4 5
837 23.39 humidity 90 10 < th dose dependent rect. 6 16
897 23.41 humidity 50 10 > th dose dependent rect. 11 23
899 23.42 humidity 60 1440 < th dose independent rect. 8 6
937 23.42 temperature 25 10 > th dose dependent rect. 24 22
943 23.43 humidity 90 30 < th dose independent rect. 23 13
966 23.44 temperature 30 30 < th dose independent rect. 12 6
1000 23.44 temperature 25 10 > th dose dependent rect. 11 23