Os04g0659400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0659400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ENT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.16 | 0.329 | 9.16 | -0.333 | 0.481 | 0.622 | -0.523 | 0.473 | -0.45 | 7.19 | 71.82 | 7821 | -- | -- |
| 49.51 | 0.328 | 9.15 | -0.37 | 0.486 | 0.651 | -0.548 | -- | -0.458 | 7.21 | 71.94 | 7821 | -- | -- |
| 49.87 | 0.329 | 9.16 | -0.337 | 0.479 | 0.609 | -- | 0.556 | -0.445 | 7.15 | 71.97 | 7821 | -- | -- |
| 50.36 | 0.331 | 9.15 | -0.388 | 0.487 | 0.643 | -- | -- | -0.462 | 7.13 | 71.97 | 7819 | -- | -- |
| 59.06 | 0.358 | 9.16 | -0.341 | -- | 0.511 | -- | 0.547 | -0.411 | -- | 70 | 8642 | -- | -- |
| 56.9 | 0.354 | 9.12 | -0.456 | 0.414 | -- | -0.506 | -- | -0.312 | 7.17 | -- | -- | -- | -- |
| 57.57 | 0.355 | 9.12 | -0.467 | 0.414 | -- | -- | -- | -0.311 | 7.07 | -- | -- | -- | -- |
| 59.33 | 0.359 | 9.16 | -0.368 | -- | 0.621 | -- | -- | -0.447 | -- | 70.51 | 8662 | -- | -- |
| 54.08 | 0.343 | 9.16 | -- | 0.41 | 0.703 | -- | -- | -0.459 | 7 | 71 | 8782 | -- | -- |
| 66.6 | 0.381 | 9.13 | -0.459 | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
| 63.32 | 0.372 | 9.11 | -- | 0.409 | -- | -- | -- | -0.259 | 7.14 | -- | -- | -- | -- |
| 62.8 | 0.369 | 9.16 | -- | -- | 0.694 | -- | -- | -0.424 | -- | 70.44 | 8658 | -- | -- |
| 72.15 | 0.396 | 9.12 | -- | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 49.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 3 | 49.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 7 | 49.38 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 9 | 49.38 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 10 | 49.41 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 11 | 49.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 15 | 49.44 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 17 | 49.44 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 21 | 49.54 | wind | 1.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 29 | 49.64 | wind | 1.0 | 720 | < th | dose independent | rect. | 11 | 4 |
| 31 | 49.67 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 34 | 49.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 44 | 49.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 47 | 49.74 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 51 | 49.77 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 57 | 49.78 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 67 | 49.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 69 | 49.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 72 | 49.82 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 109 | 49.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 117 | 49.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 122 | 49.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 127 | 49.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 139 | 49.93 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 186 | 49.99 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 220 | 50.04 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 266 | 50.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 299 | 50.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 313 | 50.14 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 323 | 50.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 353 | 50.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 379 | 50.20 | humidity | 80.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 383 | 50.20 | wind | 1.0 | 720 | < th | dose dependent | rect. | 10 | 5 |
| 422 | 50.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 429 | 50.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 8 |
| 445 | 50.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 447 | 50.25 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 452 | 50.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 464 | 50.26 | humidity | 80.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 475 | 50.26 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 494 | 50.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 496 | 50.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 497 | 50.28 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 527 | 50.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 531 | 50.30 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 532 | 50.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 544 | 50.31 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 559 | 50.32 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 564 | 50.32 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 641 | 50.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 666 | 50.38 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 669 | 50.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 682 | 50.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 686 | 50.39 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 700 | 50.40 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 725 | 50.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 735 | 50.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 743 | 50.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 771 | 50.44 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 787 | 50.45 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 815 | 50.46 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 823 | 50.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 825 | 50.46 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 838 | 50.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 862 | 50.48 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 870 | 50.48 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 899 | 50.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 900 | 50.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 921 | 50.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 955 | 50.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 962 | 50.51 | wind | 1.0 | 720 | < th | dose dependent | rect. | 13 | 2 |