Os04g0656800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase precursor (EC 1.11.1.7).
FiT-DB / Search/ Help/ Sample detail
|
Os04g0656800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Peroxidase precursor (EC 1.11.1.7).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.52 | 0.427 | 3.16 | -0.0788 | 0.0945 | -0.299 | 0.109 | 1.51 | 0.0242 | 8.35 | 1.065 | 16 | -- | -- |
| 84.35 | 0.431 | 3.14 | -0.0135 | 0.108 | -0.172 | 0.11 | -- | 0.042 | 8.37 | 1.066 | 14 | -- | -- |
| 82.56 | 0.423 | 3.16 | -0.0761 | 0.0933 | -0.305 | -- | 1.52 | 0.0245 | 8.7 | 1.048 | 16 | -- | -- |
| 84.39 | 0.431 | 3.14 | -0.0102 | 0.108 | -0.171 | -- | -- | 0.0419 | 8.24 | 1.078 | 16 | -- | -- |
| 83.04 | 0.424 | 3.16 | -0.0798 | -- | -0.326 | -- | 1.56 | 0.0247 | -- | 1.055 | 16 | -- | -- |
| 85.27 | 0.433 | 3.14 | 0.00641 | 0.14 | -- | 0.113 | -- | 0.0393 | 7.08 | -- | -- | -- | -- |
| 85.31 | 0.433 | 3.14 | 0.00851 | 0.141 | -- | -- | -- | 0.0389 | 7 | -- | -- | -- | -- |
| 85.02 | 0.431 | 3.15 | -0.0118 | -- | -0.191 | -- | -- | 0.0433 | -- | 1.055 | 16 | -- | -- |
| 84.39 | 0.43 | 3.14 | -- | 0.108 | -0.17 | -- | -- | 0.043 | 8.24 | 1.057 | 16 | -- | -- |
| 86.35 | 0.434 | 3.15 | 0.0114 | -- | -- | -- | -- | 0.0415 | -- | -- | -- | -- | -- |
| 85.31 | 0.432 | 3.14 | -- | 0.141 | -- | -- | -- | 0.038 | 6.99 | -- | -- | -- | -- |
| 85.02 | 0.431 | 3.15 | -- | -- | -0.19 | -- | -- | 0.0446 | -- | 1.055 | 16 | -- | -- |
| 86.35 | 0.434 | 3.15 | -- | -- | -- | -- | -- | 0.0403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.76 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 18 | 72.76 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 35 | 72.81 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 97 | 73.01 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 240 | 73.97 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 264 | 74.25 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 285 | 74.68 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 302 | 74.91 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 303 | 74.95 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 330 | 75.32 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 336 | 75.47 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 368 | 75.55 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 373 | 75.69 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 378 | 75.74 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 383 | 75.81 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 399 | 75.85 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 412 | 75.89 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 413 | 75.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 416 | 75.89 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 420 | 75.89 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 429 | 75.89 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 430 | 75.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 450 | 75.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 510 | 76.03 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 511 | 76.03 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 513 | 76.04 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 518 | 76.06 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 531 | 76.09 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 532 | 76.09 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 536 | 76.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 538 | 76.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 539 | 76.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 544 | 76.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 546 | 76.10 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 551 | 76.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 552 | 76.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 554 | 76.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 559 | 76.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 579 | 76.20 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 582 | 76.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 586 | 76.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 587 | 76.35 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 604 | 76.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 606 | 76.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 702 | 76.88 | humidity | 60.0 | 10 | < th | dose independent | sin | 12 | NA |
| 728 | 77.10 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 783 | 77.28 | humidity | 60.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 785 | 77.30 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 788 | 77.33 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 14 | 3 |
| 791 | 77.36 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 815 | 77.48 | humidity | 60.0 | 10 | > th | dose independent | sin | 13 | NA |
| 922 | 78.04 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 12 |