Os04g0656100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane H+-ATPase-like protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os04g0656100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Plasma membrane H+-ATPase-like protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.97 | 0.315 | 14.2 | 0.367 | 0.556 | 0.314 | -0.673 | -1.78 | -0.0127 | 22.1 | 93.73 | 319 | -- | -- |
| 45.94 | 0.316 | 14.2 | 0.346 | 0.539 | 0.792 | -0.468 | -- | -0.0476 | 22.3 | 95 | 112 | -- | -- |
| 46.02 | 0.316 | 14.2 | 0.337 | 0.542 | 0.358 | -- | -1.63 | -0.0138 | 21.8 | 93.76 | 175 | -- | -- |
| 46.83 | 0.319 | 14.2 | 0.374 | 0.537 | 0.85 | -- | -- | -0.0387 | 22.2 | 95.12 | 72 | -- | -- |
| 63.16 | 0.37 | 14.2 | 0.356 | -- | 0.323 | -- | -1.86 | -0.0217 | -- | 93.93 | 32 | -- | -- |
| 48.11 | 0.325 | 14.2 | 0.344 | 0.535 | -- | -0.521 | -- | -0.0473 | 22.5 | -- | -- | -- | -- |
| 49.21 | 0.329 | 14.2 | 0.366 | 0.539 | -- | -- | -- | -0.0453 | 22.4 | -- | -- | -- | -- |
| 61.82 | 0.368 | 14.2 | 0.363 | -- | 0.3 | -- | -- | -0.0253 | -- | 64.95 | 4 | -- | -- |
| 50.5 | 0.331 | 14.2 | -- | 0.548 | 0.795 | -- | -- | -0.0725 | 22.1 | 94.95 | 82 | -- | -- |
| 66.98 | 0.382 | 14.2 | 0.374 | -- | -- | -- | -- | -0.0435 | -- | -- | -- | -- | -- |
| 52.73 | 0.34 | 14.2 | -- | 0.541 | -- | -- | -- | -0.086 | 22.4 | -- | -- | -- | -- |
| 65.22 | 0.377 | 14.2 | -- | -- | 0.317 | -- | -- | -0.068 | -- | 63 | 3 | -- | -- |
| 70.68 | 0.392 | 14.2 | -- | -- | -- | -- | -- | -0.0851 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.21 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 3 | 43.41 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 4 | 43.42 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 5 | 43.58 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 6 | 43.60 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 7 | 43.61 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 8 | 43.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 9 | 43.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 10 | 43.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 13 | 43.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 15 | 43.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 17 | 43.78 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 68 | 43.78 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 70 | 43.78 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 72 | 43.78 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 128 | 43.92 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 130 | 43.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 131 | 43.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 153 | 44.06 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 162 | 44.11 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 163 | 44.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 164 | 44.12 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 167 | 44.14 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 190 | 44.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 196 | 44.20 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 202 | 44.24 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 213 | 44.30 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 219 | 44.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 221 | 44.34 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 231 | 44.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 245 | 44.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 246 | 44.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 250 | 44.50 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 253 | 44.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 254 | 44.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 259 | 44.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 261 | 44.60 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 282 | 44.64 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 285 | 44.66 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 289 | 44.68 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 291 | 44.69 | wind | 1.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 308 | 44.77 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 310 | 44.77 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 342 | 44.82 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 362 | 44.86 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 373 | 44.87 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 23 | 12 |
| 388 | 44.90 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 19 |
| 390 | 44.90 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 392 | 44.90 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 398 | 44.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 399 | 44.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 400 | 44.91 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 401 | 44.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 402 | 44.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 20 |
| 405 | 44.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 407 | 44.91 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 411 | 44.92 | atmosphere | 995.0 | 43200 | > th | dose independent | no | NA | NA |
| 414 | 44.92 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 417 | 44.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 420 | 44.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 22 |
| 429 | 44.93 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 452 | 44.95 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 12 | 13 |
| 487 | 44.97 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 520 | 44.98 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 523 | 44.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 553 | 45.00 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 554 | 45.00 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 13 |
| 563 | 45.01 | atmosphere | 995.0 | 43200 | < th | dose independent | no | NA | NA |
| 567 | 45.01 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 589 | 45.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 10 |
| 602 | 45.03 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 15 |
| 603 | 45.04 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 636 | 45.05 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 648 | 45.06 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 675 | 45.09 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 703 | 45.10 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 704 | 45.11 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 753 | 45.13 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 761 | 45.13 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 792 | 45.15 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 793 | 45.15 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 794 | 45.15 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 18 | 17 |
| 799 | 45.16 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 813 | 45.17 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 822 | 45.18 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 854 | 45.20 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 855 | 45.20 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 858 | 45.20 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 886 | 45.22 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 894 | 45.22 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 911 | 45.23 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 936 | 45.24 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 958 | 45.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 961 | 45.24 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 987 | 45.25 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 11 | 1 |