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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0655000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.71 (0.0327) R2 : 0.0487
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.333 (0.0688) R2dN8 : 0.0629 R2N8 : 0.0487
σ : 0.615
deviance : 173.82
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.73 0.583 3.71 -0.298 0.111 0.67 -0.107 -2.53 0.542 8.91 2.5 3834 -- --
161.83 0.592 3.68 -0.354 0.0874 0.683 -0.555 -- 0.492 9.02 2.698 3536 -- --
153.74 0.577 3.71 -0.301 0.111 0.674 -- -2.56 0.541 8.13 2.497 3834 -- --
162.07 0.593 3.66 -0.426 0.0897 0.833 -- -- 0.518 9.7 2.601 3536 -- --
154.21 0.578 3.71 -0.333 -- 0.77 -- -2.63 0.553 -- 2.445 3618 -- --
168.15 0.608 3.72 -0.272 0.162 -- -0.613 -- 0.302 10.9 -- -- -- --
169.37 0.609 3.72 -0.3 0.189 -- -- -- 0.298 9.17 -- -- -- --
162.27 0.593 3.66 -0.468 -- 0.904 -- -- 0.545 -- 2.637 3536 -- --
167.12 0.602 3.66 -- 0.105 0.655 -- -- 0.531 9.96 2.484 3535 -- --
171.44 0.612 3.72 -0.3 -- -- -- -- 0.299 -- -- -- -- --
171.73 0.613 3.71 -- 0.189 -- -- -- 0.332 9.29 -- -- -- --
167.62 0.603 3.67 -- -- 0.713 -- -- 0.541 -- 2.696 3536 -- --
173.82 0.615 3.71 -- -- -- -- -- 0.333 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 149.75 wind 1.0 30 > th dose independent rect. 2 1
2 149.97 humidity 80.0 10 > th dose independent rect. 2 1
3 150.02 wind 5.0 10 < th dose independent rect. 2 1
6 150.05 temperature 10.0 10 > th dose independent rect. 2 1
8 150.05 temperature 30.0 10 < th dose independent rect. 2 1
9 150.05 humidity 50.0 10 > th dose independent rect. 2 1
12 150.05 atmosphere 995.0 10 > th dose independent rect. 2 1
13 150.05 atmosphere 1010.0 10 < th dose independent rect. 2 1
15 150.05 radiation 1.0 10 < th dose independent rect. 2 1
20 150.05 precipitation 0.1 10 < th dose independent rect. 2 1
21 150.05 temperature 10.0 10 > th dose independent rect. 3 23
22 150.05 radiation 1.0 10 < th dose dependent rect. 2 1
27 150.05 precipitation 0.1 10 < th dose dependent rect. 2 1
28 150.08 humidity 50.0 10 > th dose dependent rect. 2 1
29 150.10 temperature 10.0 10 > th dose dependent rect. 2 1
32 150.21 wind 9.0 10 < th dose dependent rect. 2 1
37 150.38 atmosphere 1015.0 10 < th dose dependent rect. 2 1
43 150.54 atmosphere 995.0 10 > th dose dependent rect. 2 1
46 150.61 temperature 30.0 30 < th dose dependent rect. 2 1
78 150.87 atmosphere 1015.0 720 < th dose independent rect. 3 8
103 152.08 wind 9.0 10 < th dose independent rect. 3 23
104 152.18 wind 3.0 720 < th dose dependent rect. 2 1
110 153.26 atmosphere 1015.0 720 < th dose independent rect. 3 16
111 153.61 wind 3.0 4320 < th dose independent rect. 6 1
113 153.74 wind 5.0 1440 < th dose dependent rect. 14 1
114 153.79 temperature 15.0 1440 > th dose independent rect. 3 1
115 153.87 wind 9.0 720 < th dose independent rect. 3 8
118 154.02 precipitation 0.1 720 < th dose independent rect. 3 8
119 154.02 precipitation 0.1 720 < th dose dependent rect. 3 8
121 154.18 wind 3.0 4320 > th dose independent rect. 6 1
122 154.18 wind 1.0 10 > th dose independent rect. 24 11
123 154.20 wind 5.0 4320 < th dose dependent rect. 6 1
124 154.23 humidity 90.0 4320 > th dose independent rect. 2 3
125 154.28 wind 3.0 1440 > th dose independent rect. 14 1
127 154.42 wind 1.0 4320 > th dose dependent rect. 6 1
130 154.54 wind 1.0 10 > th dose independent rect. 12 23
134 154.65 wind 1.0 1440 < th dose independent rect. 8 20
135 154.66 wind 3.0 1440 < th dose independent rect. 14 1
138 154.76 precipitation 0.1 720 < th dose independent rect. 23 16
139 154.76 wind 1.0 1440 > th dose independent rect. 7 20
141 154.76 precipitation 0.1 720 < th dose dependent rect. 23 16
147 154.90 humidity 90.0 4320 > th dose dependent rect. 3 3
153 155.05 humidity 90.0 4320 > th dose dependent rect. 4 1
159 155.09 wind 3.0 4320 > th dose independent rect. 19 3
160 155.12 temperature 15.0 720 > th dose independent rect. 3 8
163 155.23 wind 1.0 720 > th dose independent rect. 7 8
169 155.49 atmosphere 995.0 30 > th dose dependent rect. 12 23
170 155.56 wind 3.0 4320 < th dose independent rect. 19 3
174 155.74 wind 5.0 43200 > th dose dependent rect. 23 1
176 155.76 atmosphere 995.0 30 > th dose dependent rect. 3 8
178 155.78 humidity 50.0 10 > th dose independent rect. 3 23
183 155.87 atmosphere 995.0 720 > th dose independent rect. 3 8
184 155.87 temperature 10.0 720 > th dose independent rect. 11 16
185 155.87 wind 3.0 4320 < th dose dependent rect. 1 21
188 155.88 wind 3.0 4320 < th dose dependent rect. 14 20
192 155.91 humidity 80.0 43200 < th dose independent rect. 9 1
197 155.96 wind 3.0 4320 < th dose independent rect. 14 18
201 155.98 wind 3.0 4320 < th dose dependent rect. 2 8
207 156.02 atmosphere 1015.0 720 < th dose independent rect. 23 16
214 156.06 wind 3.0 4320 < th dose dependent rect. 5 5
215 156.07 humidity 50.0 720 > th dose independent rect. 3 8
227 156.10 temperature 10.0 720 > th dose independent rect. 15 8
228 156.10 temperature 10.0 720 > th dose independent rect. 23 16
232 156.11 wind 3.0 4320 < th dose dependent rect. 18 16
248 156.18 wind 3.0 4320 < th dose dependent rect. 19 22
252 156.19 wind 1.0 1440 < th dose dependent rect. 8 5
262 156.22 wind 1.0 1440 < th dose independent rect. 7 16
263 156.22 wind 3.0 4320 > th dose independent rect. 13 19
269 156.24 wind 1.0 1440 > th dose independent rect. 8 15
272 156.25 wind 1.0 1440 < th dose independent rect. 8 5
274 156.25 wind 1.0 1440 < th dose dependent rect. 8 16
278 156.26 wind 3.0 4320 < th dose dependent rect. 5 23
292 156.30 wind 3.0 1440 < th dose dependent rect. 8 19
296 156.31 wind 3.0 4320 < th dose dependent rect. 1 16
299 156.32 humidity 80.0 43200 > th dose independent rect. 8 2
314 156.34 wind 3.0 1440 < th dose dependent rect. 10 17
332 156.38 wind 3.0 4320 < th dose independent rect. 19 22
345 156.41 wind 3.0 4320 < th dose dependent no NA NA
349 156.42 temperature 15.0 720 > th dose independent rect. 7 8
355 156.44 wind 1.0 1440 < th dose independent rect. 8 7
363 156.45 precipitation 0.1 30 < th dose independent rect. 3 23
367 156.45 precipitation 0.1 30 < th dose dependent rect. 3 23
372 156.46 atmosphere 995.0 10 > th dose independent rect. 3 23
373 156.46 wind 3.0 4320 < th dose dependent sin 5 NA
379 156.46 wind 3.0 4320 < th dose dependent rect. 8 23
398 156.51 temperature 15.0 1440 > th dose independent rect. 2 16
404 156.52 precipitation 0.1 720 < th dose independent rect. 3 16
405 156.52 wind 3.0 4320 < th dose independent rect. 19 18
407 156.52 precipitation 0.1 720 < th dose dependent rect. 3 16
409 156.53 temperature 15.0 1440 > th dose independent rect. 1 10
435 156.59 wind 3.0 4320 < th dose independent rect. 18 16
468 156.63 humidity 80.0 43200 < th dose independent rect. 19 1
471 156.63 wind 3.0 4320 < th dose independent rect. 24 23
490 156.67 temperature 15.0 1440 > th dose independent rect. 22 13
497 156.67 wind 3.0 4320 < th dose dependent rect. 5 18
498 156.68 wind 1.0 4320 < th dose independent rect. 8 1
500 156.68 wind 3.0 4320 > th dose independent rect. 19 22
512 156.71 atmosphere 1015.0 1440 < th dose independent rect. 2 2
529 156.73 temperature 10.0 30 > th dose dependent rect. 3 8
530 156.74 humidity 50.0 43200 > th dose independent rect. 3 1
531 156.74 atmosphere 1000.0 30 > th dose independent rect. 3 8
532 156.74 wind 3.0 4320 < th dose independent rect. 5 23
533 156.74 wind 7.0 10 < th dose independent rect. 12 23
560 156.79 humidity 80.0 43200 > th dose independent rect. 7 4
579 156.81 wind 3.0 4320 < th dose independent no NA NA
638 156.93 temperature 15.0 1440 > th dose independent rect. 7 21
641 156.93 wind 3.0 4320 > th dose independent rect. 24 23
647 156.94 wind 3.0 4320 < th dose independent rect. 21 23
678 156.99 wind 3.0 4320 > th dose independent rect. 18 16
696 157.04 wind 3.0 4320 < th dose independent sin 14 NA
706 157.05 temperature 15.0 1440 > th dose independent rect. 1 12
720 157.07 radiation 1.0 30 > th dose independent rect. 11 1
730 157.08 atmosphere 995.0 4320 > th dose independent rect. 12 1
734 157.09 humidity 90.0 4320 > th dose dependent rect. 2 11
739 157.10 wind 1.0 4320 < th dose dependent rect. 8 2
742 157.11 temperature 10.0 1440 > th dose independent rect. 12 1
751 157.11 temperature 10.0 1440 > th dose independent rect. 13 23
765 157.12 wind 3.0 1440 < th dose dependent sin 18 NA
778 157.14 temperature 15.0 720 > th dose independent rect. 5 8
783 157.15 wind 3.0 4320 > th dose independent no NA NA
791 157.16 wind 3.0 4320 < th dose independent rect. 14 14
805 157.18 wind 1.0 30 > th dose independent rect. 11 1
817 157.19 precipitation 0.1 720 < th dose independent rect. 7 8
821 157.19 precipitation 0.1 720 < th dose dependent rect. 7 8
828 157.21 humidity 50.0 30 > th dose independent rect. 12 23
832 157.22 atmosphere 995.0 720 > th dose independent rect. 11 16
841 157.23 atmosphere 995.0 30 > th dose independent rect. 12 23
844 157.24 wind 3.0 4320 > th dose independent sin 14 NA
845 157.24 temperature 10.0 30 > th dose independent rect. 11 1
847 157.24 atmosphere 995.0 30 > th dose independent rect. 11 1
848 157.24 atmosphere 1015.0 30 < th dose independent rect. 11 1
849 157.24 precipitation 0.1 30 < th dose independent rect. 11 1
852 157.24 temperature 10.0 30 > th dose independent rect. 12 23
854 157.24 precipitation 0.1 30 < th dose dependent rect. 11 1
864 157.26 precipitation 0.1 30 < th dose independent rect. 12 23
868 157.26 precipitation 0.1 30 < th dose dependent rect. 12 23
872 157.27 wind 3.0 1440 < th dose dependent rect. 12 11
883 157.29 wind 3.0 4320 < th dose dependent rect. 5 10
892 157.31 humidity 50.0 720 > th dose independent rect. 23 16
901 157.32 temperature 15.0 90 > th dose independent rect. 3 8
905 157.32 wind 3.0 4320 > th dose independent rect. 21 23
907 157.32 wind 3.0 1440 < th dose dependent rect. 10 13
939 157.37 temperature 15.0 1440 > th dose independent sin 7 NA
961 157.39 temperature 15.0 1440 > th dose independent rect. 22 20
991 157.43 radiation 20.0 14400 > th dose independent rect. 16 15
997 157.44 temperature 30.0 30 < th dose independent rect. 12 23