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Os04g0654700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to COP9 signalosome complex subunit 5b (EC 3.4.-.-) (Signalosome subunit 5b) (Jun activation domain-binding homolog 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0165) R2 : 0.00128
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0266 (0.0348) R2dN8 : 0.00166 R2N8 : 0.00128
σ : 0.311
deviance : 44.5
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.6 0.167 11.4 0.759 0.577 0.23 0.0856 -0.57 0.141 17 80.14 1293 -- --
12.93 0.167 11.4 0.734 0.57 0.217 0.0502 -- 0.138 17 80.32 1296 -- --
12.62 0.165 11.4 0.758 0.577 0.231 -- -0.554 0.141 17 80.23 1292 -- --
12.92 0.167 11.4 0.712 0.576 0.204 -- -- 0.131 17 80.33 1291 -- --
26.29 0.24 11.4 0.683 -- -0.223 -- -0.142 0.105 -- 80 1265 -- --
13.46 0.172 11.4 0.708 0.594 -- 0.0639 -- 0.118 16.9 -- -- -- --
13.47 0.172 11.4 0.708 0.594 -- -- -- 0.118 16.9 -- -- -- --
26.43 0.24 11.4 0.68 -- -0.223 -- -- 0.104 -- 80 1265 -- --
26.02 0.238 11.4 -- 0.621 0.214 -- -- 0.0569 17.2 82.26 2101 -- --
32.1 0.265 11.4 0.686 -- -- -- -- 0.103 -- -- -- -- --
26.67 0.242 11.4 -- 0.582 -- -- -- 0.0392 16.9 -- -- -- --
38.62 0.29 11.4 -- -- -0.227 -- -- 0.0287 -- 80 1265 -- --
44.5 0.311 11.4 -- -- -- -- -- 0.0266 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.71 humidity 90.0 720 > th dose dependent rect. 21 4
4 11.81 humidity 90.0 720 > th dose dependent rect. 23 1
5 11.81 atmosphere 1005.0 270 > th dose dependent rect. 1 4
8 11.86 humidity 90.0 720 > th dose independent rect. 21 4
11 11.86 atmosphere 1005.0 10 > th dose dependent rect. 3 5
40 12.04 humidity 90.0 720 > th dose dependent rect. 14 12
44 12.05 atmosphere 1005.0 270 > th dose independent rect. 24 6
45 12.05 atmosphere 1005.0 10 > th dose dependent rect. 1 7
51 12.07 radiation 1.0 1440 < th dose independent rect. 11 1
52 12.07 radiation 1.0 1440 < th dose dependent rect. 11 1
64 12.10 atmosphere 1005.0 270 > th dose independent rect. 1 4
86 12.15 humidity 70.0 1440 > th dose dependent rect. 12 1
98 12.19 atmosphere 1005.0 10 > th dose independent rect. 1 7
104 12.20 humidity 70.0 720 > th dose dependent rect. 20 5
116 12.23 humidity 80.0 1440 > th dose independent rect. 12 2
117 12.23 humidity 80.0 1440 < th dose independent rect. 12 2
119 12.24 atmosphere 1005.0 90 > th dose independent rect. 3 5
129 12.25 humidity 90.0 10 < th dose independent rect. 2 6
135 12.26 humidity 90.0 720 > th dose dependent sin 17 NA
151 12.28 atmosphere 1005.0 10 > th dose independent rect. 3 5
167 12.30 humidity 70.0 720 > th dose dependent rect. 22 3
193 12.33 humidity 80.0 1440 > th dose independent rect. 11 16
198 12.33 humidity 70.0 720 > th dose dependent rect. 22 1
204 12.34 wind 1.0 270 > th dose independent rect. 3 1
229 12.35 humidity 80.0 1440 > th dose independent rect. 11 13
243 12.36 humidity 90.0 720 < th dose dependent rect. 20 2
260 12.37 radiation 10.0 1440 < th dose dependent rect. 12 3
289 12.39 humidity 90.0 720 > th dose independent rect. 15 11
311 12.41 wind 5.0 4320 < th dose independent rect. 9 1
318 12.41 wind 3.0 4320 > th dose dependent rect. 8 2
324 12.42 radiation 10.0 1440 > th dose independent rect. 11 3
330 12.42 humidity 80.0 1440 < th dose independent rect. 11 16
357 12.43 humidity 80.0 1440 < th dose independent rect. 11 14
359 12.43 wind 3.0 4320 > th dose dependent rect. 6 4
367 12.44 humidity 80.0 1440 < th dose independent rect. 11 12
381 12.45 wind 5.0 4320 > th dose independent rect. 9 1
410 12.46 radiation 1.0 1440 > th dose independent rect. 13 1
411 12.46 humidity 90.0 720 < th dose independent rect. 20 2
441 12.47 humidity 80.0 1440 > th dose independent sin 17 NA
491 12.48 humidity 70.0 1440 > th dose dependent rect. 11 18
493 12.48 humidity 90.0 30 > th dose dependent rect. 5 22
530 12.49 humidity 70.0 1440 > th dose dependent rect. 11 16
557 12.51 atmosphere 1005.0 1440 < th dose independent rect. 9 2
596 12.52 atmosphere 1005.0 1440 > th dose independent rect. 9 2
600 12.52 humidity 90.0 720 < th dose independent rect. 20 5
602 12.52 radiation 1.0 1440 < th dose independent rect. 8 5
614 12.52 radiation 1.0 1440 < th dose dependent rect. 8 5
619 12.52 atmosphere 1005.0 30 > th dose dependent rect. 16 11
626 12.53 wind 5.0 270 < th dose independent rect. 3 2
628 12.53 precipitation 0.1 270 > th dose independent rect. 2 2
652 12.53 radiation 1.0 90 < th dose independent rect. 5 22
655 12.53 precipitation 0.1 270 > th dose dependent rect. 2 2
662 12.53 atmosphere 1005.0 270 > th dose dependent rect. 14 9
663 12.53 atmosphere 1005.0 30 > th dose dependent rect. 18 9
673 12.53 atmosphere 1005.0 10 > th dose dependent rect. 14 13
680 12.53 radiation 1.0 90 < th dose dependent rect. 5 22
681 12.54 humidity 80.0 1440 < th dose independent sin 18 NA
735 12.55 wind 5.0 4320 < th dose independent rect. 6 4
771 12.55 humidity 90.0 270 > th dose dependent rect. 16 16
799 12.56 wind 3.0 1440 < th dose dependent rect. 6 2
813 12.56 humidity 90.0 270 > th dose dependent rect. 17 14
832 12.57 wind 1.0 1440 < th dose independent rect. 6 1
846 12.57 atmosphere 1005.0 720 > th dose dependent rect. 15 1
855 12.57 atmosphere 1005.0 270 < th dose dependent rect. 23 8
875 12.58 precipitation 0.1 270 < th dose independent rect. 3 2
876 12.58 wind 5.0 4320 > th dose independent rect. 6 4
892 12.58 precipitation 0.1 270 < th dose dependent rect. 3 2
920 12.59 wind 1.0 1440 > th dose independent rect. 6 2
933 12.59 atmosphere 1015.0 270 < th dose independent rect. 10 20
954 12.59 atmosphere 995.0 90 > th dose dependent rect. 18 9
956 12.59 atmosphere 1005.0 10 < th dose dependent rect. 24 9
978 12.60 temperature 25.0 10 > th dose independent rect. 1 6
986 12.60 atmosphere 1010.0 270 < th dose independent rect. 12 17
987 12.60 humidity 50.0 90 > th dose independent rect. 7 20
989 12.60 wind 9.0 270 < th dose independent rect. 5 22