Os04g0652400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulphate transporter protein.
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Os04g0652400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulphate transporter protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.56 | 0.429 | 12.8 | 0.67 | 1.14 | -0.437 | -0.544 | 0.807 | 0.0776 | 3.56 | 20.6 | 505 | -- | -- |
| 85.32 | 0.43 | 12.8 | 0.536 | 1.12 | -0.561 | -0.559 | -- | 0.0474 | 3.63 | 19.7 | 392 | -- | -- |
| 84.32 | 0.428 | 12.8 | 0.677 | 1.12 | -0.421 | -- | 0.853 | 0.0781 | 3.65 | 20.57 | 425 | -- | -- |
| 86.1 | 0.432 | 12.8 | 0.553 | 1.09 | -0.606 | -- | -- | 0.0324 | 3.65 | 19.6 | 363 | -- | -- |
| 150.16 | 0.571 | 12.8 | 0.588 | -- | -0.722 | -- | 0.00874 | -0.00811 | -- | 19.4 | 207 | -- | -- |
| 93.81 | 0.454 | 12.8 | 0.341 | 1.17 | -- | -0.588 | -- | -0.066 | 3.73 | -- | -- | -- | -- |
| 94.84 | 0.456 | 12.8 | 0.35 | 1.16 | -- | -- | -- | -0.0627 | 3.75 | -- | -- | -- | -- |
| 129.73 | 0.53 | 12.8 | 0.607 | -- | -0.738 | -- | -- | 0.182 | -- | 26.34 | 269 | -- | -- |
| 93.23 | 0.45 | 12.8 | -- | 1.12 | -0.418 | -- | -- | -0.0312 | 3.66 | 19.9 | 377 | -- | -- |
| 169.61 | 0.609 | 12.8 | 0.398 | -- | -- | -- | -- | -0.0317 | -- | -- | -- | -- | -- |
| 98.07 | 0.463 | 12.8 | -- | 1.17 | -- | -- | -- | -0.102 | 3.75 | -- | -- | -- | -- |
| 138.49 | 0.548 | 12.8 | -- | -- | -0.676 | -- | -- | 0.0822 | -- | 26.36 | 256 | -- | -- |
| 173.8 | 0.615 | 12.8 | -- | -- | -- | -- | -- | -0.0759 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 17 | 73.38 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 29 | 74.42 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 48 | 75.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 72 | 76.20 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 108 | 76.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 117 | 77.01 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 143 | 77.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 21 |
| 235 | 78.27 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 261 | 78.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 8 |
| 270 | 78.67 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 6 |
| 278 | 78.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 338 | 79.30 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 355 | 79.41 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 364 | 79.50 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 367 | 79.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 368 | 79.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 373 | 79.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 383 | 79.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 414 | 79.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 425 | 79.79 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 435 | 79.83 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 441 | 79.85 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 450 | 79.88 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 4 |
| 460 | 79.91 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 469 | 79.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 475 | 79.96 | wind | 3.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 497 | 80.04 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 504 | 80.07 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 514 | 80.14 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 519 | 80.16 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 528 | 80.18 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 543 | 80.23 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 547 | 80.23 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 4 |
| 553 | 80.25 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 557 | 80.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 563 | 80.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 567 | 80.29 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 573 | 80.30 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 588 | 80.32 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 604 | 80.35 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 628 | 80.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 641 | 80.45 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 646 | 80.45 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 15 |
| 660 | 80.47 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 663 | 80.48 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 664 | 80.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 1 |
| 679 | 80.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 685 | 80.50 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 699 | 80.53 | humidity | 80.0 | 270 | < th | dose independent | rect. | 10 | 4 |
| 702 | 80.53 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 709 | 80.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 710 | 80.54 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 715 | 80.54 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 756 | 80.59 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 761 | 80.59 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 766 | 80.60 | radiation | 10.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 774 | 80.61 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 785 | 80.63 | temperature | 10.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 787 | 80.63 | humidity | 50.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 788 | 80.63 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 798 | 80.63 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 799 | 80.63 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 800 | 80.63 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 803 | 80.64 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 811 | 80.65 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 822 | 80.66 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 823 | 80.66 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 825 | 80.66 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 832 | 80.67 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 833 | 80.67 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 843 | 80.68 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 847 | 80.69 | wind | 3.0 | 10 | > th | dose independent | rect. | 18 | 3 |
| 851 | 80.70 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 859 | 80.71 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 884 | 80.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 894 | 80.74 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 21 |
| 937 | 80.79 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 944 | 80.80 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 962 | 80.81 | wind | 9.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 971 | 80.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 984 | 80.85 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 993 | 80.86 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |