Os04g0650400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0650400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 203.09 | 0.67 | 5.67 | 1.46 | 0.678 | 0.726 | -0.791 | -2.61 | -0.377 | 18.1 | 10.01 | 1443 | -- | -- |
| 215.05 | 0.683 | 5.66 | 1.8 | 0.72 | 0.756 | -0.75 | -- | -0.357 | 18 | 10.1 | 1444 | -- | -- |
| 204.49 | 0.666 | 5.67 | 1.45 | 0.666 | 0.73 | -- | -2.6 | -0.376 | 18.3 | 10.01 | 1447 | -- | -- |
| 214.25 | 0.682 | 5.6 | 1.88 | 0.675 | 0.713 | -- | -- | -0.216 | 17.7 | 10.04 | 1356 | -- | -- |
| 207.29 | 0.671 | 5.59 | 1.74 | -- | 1.08 | -- | -2.67 | -0.165 | -- | 10.12 | 671 | -- | -- |
| 226.45 | 0.705 | 5.56 | 2.09 | 0.677 | -- | -0.833 | -- | -0.0114 | 18.1 | -- | -- | -- | -- |
| 227.99 | 0.707 | 5.56 | 2.1 | 0.674 | -- | -- | -- | -0.0153 | 18.3 | -- | -- | -- | -- |
| 215.81 | 0.684 | 5.57 | 1.93 | -- | 0.94 | -- | -- | -0.141 | -- | 10.06 | 801 | -- | -- |
| 307.22 | 0.816 | 5.58 | -- | 0.656 | 1.01 | -- | -- | -0.235 | 17.5 | 10.01 | 1366 | -- | -- |
| 251.6 | 0.741 | 5.55 | 2.08 | -- | -- | -- | -- | -0.0297 | -- | -- | -- | -- | -- |
| 343.73 | 0.867 | 5.61 | -- | 0.646 | -- | -- | -- | -0.249 | 18.5 | -- | -- | -- | -- |
| 308.72 | 0.818 | 5.65 | -- | -- | 1.28 | -- | -- | -0.442 | -- | 10.24 | 965 | -- | -- |
| 365.48 | 0.892 | 5.6 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.67 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 4 |
| 2 | 193.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 3 | 193.85 | humidity | 90 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 4 | 193.86 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 5 | 193.96 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 6 |
| 6 | 193.96 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 6 |
| 7 | 194.36 | humidity | 90 | 720 | > th | dose independent | rect. | 11 | 2 |
| 14 | 196.43 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 7 |
| 15 | 196.52 | humidity | 80 | 720 | < th | dose independent | rect. | 24 | 15 |
| 20 | 196.93 | humidity | 80 | 720 | < th | dose independent | rect. | 8 | 7 |
| 21 | 197.00 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 9 |
| 25 | 197.08 | humidity | 80 | 720 | > th | dose independent | rect. | 1 | 14 |
| 66 | 199.54 | humidity | 80 | 720 | < th | dose independent | sin | 3 | NA |
| 70 | 199.72 | radiation | 1 | 720 | < th | dose independent | rect. | 12 | 1 |
| 72 | 199.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 89 | 200.02 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 8 |
| 102 | 200.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 105 | 200.38 | humidity | 80 | 720 | > th | dose independent | sin | 3 | NA |
| 125 | 200.65 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 126 | 200.65 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 131 | 200.69 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 133 | 200.69 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 146 | 200.95 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 164 | 201.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 171 | 201.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 226 | 201.52 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 244 | 201.67 | humidity | 70 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 322 | 202.63 | humidity | 80 | 270 | > th | dose independent | rect. | 22 | 23 |
| 324 | 202.65 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 333 | 202.73 | radiation | 10 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 334 | 202.74 | radiation | 10 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 349 | 202.78 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 394 | 203.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 402 | 203.08 | radiation | 10 | 1440 | > th | dose independent | sin | 0 | NA |
| 420 | 203.18 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 536 | 203.44 | humidity | 80 | 270 | > th | dose independent | rect. | 5 | 23 |
| 591 | 203.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 19 |
| 608 | 203.73 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 618 | 203.80 | humidity | 90 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 619 | 203.81 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 630 | 203.86 | humidity | 80 | 270 | > th | dose independent | rect. | 18 | 23 |
| 631 | 203.88 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 665 | 204.01 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 683 | 204.12 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 684 | 204.12 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 685 | 204.12 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 740 | 204.25 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 11 |
| 785 | 204.37 | radiation | 1 | 720 | < th | dose independent | rect. | 21 | 19 |
| 824 | 204.45 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 832 | 204.50 | humidity | 80 | 270 | > th | dose independent | no | NA | NA |
| 860 | 204.52 | humidity | 70 | 10 | > th | dose dependent | rect. | 18 | 22 |
| 893 | 204.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 19 | 21 |
| 932 | 204.74 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 941 | 204.77 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 4 | 1 |