Os04g0650200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os04g0650200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 279.54 | 0.786 | 3.32 | 0.0819 | 0.177 | 1.29 | -0.601 | 3.44 | -0.0642 | 8.96 | 18.9 | 5948 | -- | -- |
| 287.4 | 0.796 | 3.19 | 0.173 | 0.228 | 0.235 | -0.584 | -- | -0.0218 | 9.8 | 21.7 | 6200 | -- | -- |
| 280.68 | 0.78 | 3.32 | 0.0556 | 0.188 | 1.29 | -- | 3.45 | -0.0666 | 8.12 | 18.92 | 5947 | -- | -- |
| 288.7 | 0.797 | 3.19 | 0.15 | 0.233 | 0.235 | -- | -- | -0.0231 | 9.55 | 21.7 | 6200 | -- | -- |
| 282.62 | 0.783 | 3.32 | 0.0773 | -- | 1.3 | -- | 3.46 | -0.0592 | -- | 18.99 | 6102 | -- | -- |
| 290.42 | 0.799 | 3.21 | 0.105 | 0.177 | -- | -0.613 | -- | -0.0848 | 9.07 | -- | -- | -- | -- |
| 291.65 | 0.8 | 3.21 | 0.0818 | 0.187 | -- | -- | -- | -0.0863 | 8.3 | -- | -- | -- | -- |
| 290.62 | 0.794 | 3.19 | 0.298 | -- | 0.341 | -- | -- | 0.0447 | -- | 22.1 | 6201 | -- | -- |
| 289.27 | 0.796 | 3.2 | -- | 0.228 | 0.214 | -- | -- | -0.0447 | 9.41 | 21.7 | 6200 | -- | -- |
| 293.59 | 0.801 | 3.21 | 0.0831 | -- | -- | -- | -- | -0.0843 | -- | -- | -- | -- | -- |
| 291.83 | 0.799 | 3.21 | -- | 0.187 | -- | -- | -- | -0.0954 | 8.27 | -- | -- | -- | -- |
| 291.84 | 0.798 | 3.2 | -- | -- | 0.153 | -- | -- | -0.036 | -- | 23.61 | 6284 | -- | -- |
| 293.77 | 0.8 | 3.22 | -- | -- | -- | -- | -- | -0.0935 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 271.64 | temperature | 30 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 3 | 271.69 | temperature | 30 | 90 | > th | dose independent | rect. | 9 | 1 |
| 154 | 272.95 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 155 | 273.10 | wind | 1 | 10 | < th | dose dependent | rect. | 24 | 3 |
| 161 | 273.19 | wind | 1 | 10 | < th | dose dependent | rect. | 15 | 12 |
| 183 | 274.06 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 9 |
| 207 | 274.44 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 1 |
| 219 | 274.88 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 220 | 274.88 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 235 | 275.06 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 13 |
| 256 | 275.20 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 7 |
| 270 | 275.36 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 19 |
| 292 | 275.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 321 | 276.35 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 1 |
| 348 | 277.22 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 363 | 277.32 | wind | 7 | 30 | > th | dose independent | rect. | 13 | 2 |
| 365 | 277.34 | wind | 7 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 377 | 277.45 | wind | 7 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 378 | 277.47 | wind | 1 | 10 | < th | dose independent | rect. | 22 | 4 |
| 409 | 277.71 | wind | 1 | 10 | < th | dose dependent | sin | 16 | NA |
| 424 | 277.91 | wind | 1 | 10 | < th | dose independent | rect. | 17 | 9 |
| 438 | 277.98 | temperature | 20 | 90 | > th | dose independent | rect. | 1 | 14 |
| 488 | 278.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 493 | 278.26 | temperature | 20 | 90 | > th | dose independent | sin | 5 | NA |
| 520 | 278.40 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 14 |
| 536 | 278.50 | temperature | 25 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 542 | 278.54 | temperature | 20 | 30 | < th | dose independent | sin | 4 | NA |
| 563 | 278.68 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 12 |
| 581 | 278.78 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 6 |
| 590 | 278.82 | wind | 3 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 606 | 278.86 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 11 |
| 622 | 278.92 | wind | 1 | 90 | < th | dose independent | rect. | 17 | 9 |
| 623 | 278.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 625 | 278.93 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 660 | 279.01 | humidity | 60 | 43200 | < th | dose dependent | sin | 1 | NA |
| 663 | 279.01 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 676 | 279.05 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 701 | 279.15 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 705 | 279.17 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 854 | 279.38 | humidity | 60 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 863 | 279.39 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 975 | 279.59 | wind | 7 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 978 | 279.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |