Os04g0646100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell cycle control protein cwf14.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0646100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cell cycle control protein cwf14.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.95 | 0.155 | 13.3 | -0.0209 | 0.229 | 0.32 | 0.13 | 0.698 | 0.0742 | 23.9 | 63 | 7493 | -- | -- |
| 11.24 | 0.156 | 13.3 | 0.00148 | 0.211 | 0.309 | 0.0747 | -- | 0.0281 | 23.9 | 63 | 4719 | -- | -- |
| 11.02 | 0.155 | 13.3 | -0.0249 | 0.228 | 0.319 | -- | 0.697 | 0.0737 | 24 | 63.47 | 7491 | -- | -- |
| 11.28 | 0.156 | 13.3 | 0.0169 | 0.221 | 0.303 | -- | -- | 0.0245 | 23.7 | 63.08 | 4722 | -- | -- |
| 14.28 | 0.176 | 13.3 | -0.0231 | -- | 0.324 | -- | 0.595 | 0.0733 | -- | 64 | 7458 | -- | -- |
| 13.04 | 0.169 | 13.3 | 0.0301 | 0.227 | -- | 0.086 | -- | 0.0732 | 0.0296 | -- | -- | -- | -- |
| 13.07 | 0.169 | 13.3 | 0.0266 | 0.227 | -- | -- | -- | 0.0728 | 0.0749 | -- | -- | -- | -- |
| 14.15 | 0.175 | 13.3 | 0.0263 | -- | 0.358 | -- | -- | 0.00478 | -- | 62 | 4615 | -- | -- |
| 11.27 | 0.156 | 13.3 | -- | 0.215 | 0.307 | -- | -- | 0.0138 | 23.7 | 63.03 | 4701 | -- | -- |
| 16.31 | 0.189 | 13.3 | 0.0338 | -- | -- | -- | -- | 0.076 | -- | -- | -- | -- | -- |
| 13.09 | 0.169 | 13.3 | -- | 0.227 | -- | -- | -- | 0.0698 | 0.0815 | -- | -- | -- | -- |
| 14.15 | 0.175 | 13.3 | -- | -- | 0.351 | -- | -- | 0.00731 | -- | 63 | 4606 | -- | -- |
| 16.34 | 0.189 | 13.3 | -- | -- | -- | -- | -- | 0.0723 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 68 | 10.57 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 74 | 10.59 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 96 | 10.66 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 98 | 10.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 103 | 10.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 162 | 10.83 | humidity | 70.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 163 | 10.83 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 169 | 10.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 171 | 10.84 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 10 |
| 200 | 10.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 202 | 10.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 205 | 10.87 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 218 | 10.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 219 | 10.89 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 220 | 10.89 | humidity | 70.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 222 | 10.89 | temperature | 15.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 242 | 10.90 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 6 |
| 254 | 10.91 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 7 |
| 263 | 10.91 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 288 | 10.93 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 290 | 10.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 297 | 10.93 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 325 | 10.95 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 326 | 10.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 329 | 10.95 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 340 | 10.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 341 | 10.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 374 | 10.97 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 377 | 10.98 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 8 |
| 408 | 10.99 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 412 | 10.99 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 428 | 10.99 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 436 | 11.00 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 437 | 11.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 451 | 11.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 454 | 11.01 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 471 | 11.01 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 21 |
| 474 | 11.01 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 496 | 11.02 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 536 | 11.03 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 609 | 11.05 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 637 | 11.05 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 641 | 11.06 | humidity | 70.0 | 270 | > th | dose independent | sin | 17 | NA |
| 642 | 11.06 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 648 | 11.06 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 649 | 11.06 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 665 | 11.06 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 673 | 11.07 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 724 | 11.08 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 824 | 11.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 836 | 11.10 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 842 | 11.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 855 | 11.11 | humidity | 60.0 | 4320 | > th | dose independent | sin | 20 | NA |
| 883 | 11.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 19 |
| 900 | 11.11 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 904 | 11.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 915 | 11.12 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 947 | 11.12 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 955 | 11.12 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 982 | 11.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 1 |