Os04g0642000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MDR-like p-glycoprotein.
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Os04g0642000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MDR-like p-glycoprotein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.11 | 0.552 | 5.09 | 1.54 | 0.0717 | 1.07 | 0.919 | -0.397 | 0.93 | 13 | 18.9 | 1819 | -- | -- |
| 138.24 | 0.548 | 5.08 | 1.57 | 0.0717 | 1.19 | 0.938 | -- | 0.939 | 13 | 18.89 | 1798 | -- | -- |
| 139.78 | 0.551 | 5.09 | 1.57 | 0.22 | 1.07 | -- | -0.323 | 0.925 | 17.5 | 19.1 | 1807 | -- | -- |
| 139.9 | 0.551 | 5.08 | 1.63 | 0.212 | 1.15 | -- | -- | 0.953 | 17.6 | 18.97 | 1769 | -- | -- |
| 141.94 | 0.555 | 5.09 | 1.59 | -- | 1.07 | -- | -0.355 | 0.928 | -- | 19 | 1808 | -- | -- |
| 155.59 | 0.585 | 5.04 | 2.01 | 0.114 | -- | 0.805 | -- | 1.12 | 14.1 | -- | -- | -- | -- |
| 156.45 | 0.586 | 5.04 | 2.03 | 0.214 | -- | -- | -- | 1.13 | 17.7 | -- | -- | -- | -- |
| 142.15 | 0.555 | 5.08 | 1.62 | -- | 1.14 | -- | -- | 0.952 | -- | 19 | 1793 | -- | -- |
| 154.84 | 0.58 | 5.19 | -- | 0.242 | 1.81 | -- | -- | 0.523 | 18.3 | 16.8 | 47283 | -- | -- |
| 158.83 | 0.589 | 5.04 | 2.02 | -- | -- | -- | -- | 1.12 | -- | -- | -- | -- | -- |
| 265.25 | 0.762 | 5.09 | -- | 0.183 | -- | -- | -- | 0.902 | 18.1 | -- | -- | -- | -- |
| 155.78 | 0.581 | 5.17 | -- | -- | 1.77 | -- | -- | 0.529 | -- | 17.43 | 47520 | -- | -- |
| 266.99 | 0.763 | 5.09 | -- | -- | -- | -- | -- | 0.898 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 12 | 127.45 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 16 | 127.72 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 27 | 128.23 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 29 | 128.38 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 37 | 128.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 43 | 128.79 | wind | 3 | 43200 | < th | dose dependent | sin | 8 | NA |
| 48 | 128.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 56 | 128.96 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 81 | 129.29 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 82 | 129.29 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 89 | 129.40 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 110 | 129.61 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 114 | 129.66 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 116 | 129.67 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 188 | 130.42 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 233 | 130.74 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 255 | 130.89 | wind | 3 | 43200 | < th | dose independent | sin | 4 | NA |
| 257 | 130.90 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 269 | 130.95 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 286 | 131.02 | wind | 3 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 296 | 131.06 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 303 | 131.09 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 307 | 131.10 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 373 | 131.33 | wind | 3 | 43200 | > th | dose independent | sin | 3 | NA |
| 424 | 131.47 | wind | 3 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 495 | 131.68 | wind | 3 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 607 | 131.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 665 | 132.01 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 709 | 132.07 | wind | 3 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 720 | 132.09 | wind | 3 | 43200 | < th | dose independent | sin | 11 | NA |
| 731 | 132.10 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 785 | 132.19 | humidity | 90 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 820 | 132.23 | wind | 1 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 936 | 132.40 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 6 |