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Os04g0640300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0311) R2 : 0.526
β1 : -0.901 (0.114) R2dD : 0.0673 R2D : 0.0469
β2 : 1.67 (0.081) R2dC : 0.442 R2C : 0.446
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.292 (0.0665) R2dN8 : 0.0268 R2N8 : 0.0103
σ : 0.585
deviance : 156.26
__
_____
C
peak time of C : 17.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
142.8 0.561 7.57 -0.961 1.64 -0.447 -1.22 -1.3 -0.289 17.6 38.64 10 -- --
147.19 0.565 7.57 -0.903 1.64 -0.448 -1.03 -- -0.3 17.6 40 14 -- --
146.35 0.563 7.57 -0.948 1.64 -0.435 -- -1.27 -0.291 17.6 37.57 11 -- --
150.29 0.571 7.57 -0.927 1.63 -0.469 -- -- -0.305 17.6 40 14 -- --
282.53 0.783 7.55 -0.984 -- -0.622 -- -1.13 -0.348 -- 35.1 16 -- --
153.65 0.581 7.57 -0.904 1.67 -- -1.05 -- -0.287 17.4 -- -- -- --
156.26 0.585 7.57 -0.901 1.67 -- -- -- -0.292 17.2 -- -- -- --
186.6 0.636 7.56 -1.72 -- -1.48 -- -- -0.519 -- 1.095 624 -- --
172.32 0.611 7.55 -- 1.65 -0.426 -- -- -0.183 17.5 37.82 17 -- --
301.4 0.811 7.55 -0.959 -- -- -- -- -0.333 -- -- -- -- --
177.64 0.623 7.55 -- 1.68 -- -- -- -0.191 17.2 -- -- -- --
193.39 0.648 7.54 -- -- -1.81 -- -- -0.287 -- 2.089 651 -- --
325.65 0.842 7.52 -- -- -- -- -- -0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 135.83 humidity 90.0 90 < th dose dependent rect. 3 5
7 136.71 humidity 90.0 90 < th dose dependent rect. 5 3
9 136.91 humidity 50.0 270 > th dose independent rect. 14 16
19 138.15 radiation 1.0 10 < th dose dependent sin 10 NA
21 138.20 humidity 50.0 270 > th dose independent rect. 3 16
26 138.29 humidity 90.0 10 < th dose dependent rect. 7 1
28 138.36 atmosphere 1005.0 90 > th dose independent rect. 3 6
38 138.62 radiation 30.0 10 < th dose dependent sin 11 NA
39 138.66 temperature 30.0 90 < th dose independent rect. 16 16
42 138.72 radiation 1.0 10 > th dose dependent rect. 5 3
45 138.72 atmosphere 1000.0 90 > th dose dependent rect. 3 6
59 138.88 radiation 10.0 30 > th dose independent rect. 7 1
61 138.98 radiation 1.0 30 < th dose independent sin 10 NA
66 139.06 humidity 50.0 270 > th dose independent rect. 13 8
72 139.16 temperature 10.0 90 > th dose dependent rect. 8 19
74 139.17 humidity 50.0 270 > th dose dependent rect. 19 8
88 139.26 precipitation 0.1 270 < th dose independent rect. 9 16
90 139.26 precipitation 0.1 270 < th dose dependent rect. 9 16
92 139.29 humidity 80.0 90 < th dose independent rect. 6 2
106 139.33 humidity 90.0 10 < th dose independent rect. 3 6
109 139.33 precipitation 0.1 90 < th dose independent rect. 9 18
111 139.33 precipitation 0.1 90 < th dose dependent rect. 9 18
128 139.37 precipitation 0.1 270 < th dose independent rect. 1 8
130 139.37 precipitation 0.1 270 < th dose dependent rect. 1 8
134 139.40 humidity 60.0 270 > th dose independent rect. 1 8
137 139.44 wind 7.0 270 < th dose independent rect. 1 8
140 139.45 wind 9.0 270 < th dose independent rect. 3 16
143 139.48 precipitation 0.1 270 < th dose independent rect. 2 6
144 139.48 precipitation 0.1 270 < th dose dependent rect. 2 6
145 139.48 radiation 1.0 270 < th dose dependent rect. 5 22
148 139.51 wind 7.0 270 < th dose independent rect. 2 6
149 139.51 humidity 80.0 90 < th dose independent rect. 2 6
150 139.51 temperature 30.0 10 < th dose independent rect. 16 17
151 139.52 atmosphere 1005.0 270 > th dose independent rect. 3 3
155 139.56 temperature 10.0 270 > th dose independent rect. 1 8
158 139.56 atmosphere 995.0 270 > th dose independent rect. 1 8
159 139.56 atmosphere 1015.0 270 < th dose independent rect. 1 8
160 139.56 temperature 10.0 270 > th dose independent rect. 9 16
163 139.60 atmosphere 1010.0 90 < th dose independent rect. 3 6
167 139.62 humidity 60.0 90 > th dose independent rect. 3 6
170 139.63 temperature 30.0 270 < th dose independent rect. 1 8
172 139.63 radiation 10.0 10 > th dose dependent rect. 7 1
199 139.64 humidity 80.0 10 < th dose independent rect. 5 3
205 139.66 radiation 40.0 270 < th dose independent rect. 14 16
212 139.67 temperature 10.0 270 > th dose independent rect. 2 6
214 139.67 temperature 30.0 270 < th dose independent rect. 2 6
217 139.67 atmosphere 995.0 270 > th dose independent rect. 2 6
229 139.67 temperature 10.0 270 > th dose independent rect. 8 18
244 139.68 radiation 40.0 90 < th dose independent rect. 3 8
248 139.70 precipitation 0.1 270 < th dose independent rect. 19 8
250 139.70 precipitation 0.1 270 < th dose dependent rect. 19 8
253 139.72 wind 9.0 270 < th dose independent rect. 19 8
254 139.72 temperature 10.0 270 > th dose independent rect. 19 8
255 139.72 temperature 30.0 270 < th dose independent rect. 19 8
256 139.72 humidity 50.0 270 > th dose independent rect. 19 8
257 139.72 atmosphere 995.0 270 > th dose independent rect. 19 8
258 139.72 radiation 1.0 270 < th dose independent rect. 19 8
263 139.72 temperature 10.0 270 > th dose independent rect. 3 16
264 139.72 atmosphere 1015.0 270 < th dose independent rect. 3 16
266 139.72 radiation 1.0 270 < th dose dependent rect. 19 8
271 139.73 wind 9.0 270 < th dose dependent rect. 2 6
293 139.80 temperature 30.0 270 < th dose independent rect. 14 17
298 139.81 humidity 80.0 10 < th dose independent rect. 23 9
302 139.82 precipitation 0.1 270 < th dose independent rect. 3 16
303 139.82 precipitation 0.1 270 < th dose dependent rect. 3 16
339 139.91 radiation 40.0 270 < th dose dependent rect. 15 15
347 139.92 radiation 20.0 270 < th dose independent rect. 15 15
368 139.93 temperature 15.0 10 > th dose dependent rect. 9 18
369 139.94 radiation 40.0 270 < th dose independent rect. 2 6
379 139.97 humidity 80.0 30 < th dose dependent rect. 21 11
399 140.00 temperature 10.0 43200 > th dose independent rect. 9 6
400 140.00 radiation 40.0 270 < th dose independent rect. 1 8
434 140.08 atmosphere 995.0 270 > th dose independent rect. 8 18
478 140.14 atmosphere 995.0 270 > th dose independent rect. 3 16
532 140.20 wind 9.0 270 < th dose independent rect. 14 16
553 140.22 temperature 10.0 10 > th dose dependent rect. 9 5
554 140.23 atmosphere 995.0 270 > th dose independent rect. 9 16
559 140.25 temperature 10.0 270 > th dose independent rect. 6 8
560 140.25 atmosphere 995.0 270 > th dose independent rect. 6 8
561 140.25 atmosphere 1015.0 270 < th dose independent rect. 6 8
562 140.25 precipitation 0.1 270 < th dose independent rect. 6 8
563 140.25 temperature 10.0 270 > th dose independent rect. 14 16
566 140.25 precipitation 0.1 270 < th dose dependent rect. 6 8
578 140.29 radiation 40.0 270 < th dose independent rect. 10 22
582 140.30 wind 9.0 270 < th dose independent rect. 9 16
594 140.31 wind 9.0 90 < th dose independent rect. 9 18
597 140.31 atmosphere 1000.0 10 > th dose dependent rect. 3 6
600 140.33 wind 9.0 270 < th dose independent rect. 6 8
610 140.35 humidity 80.0 10 < th dose independent rect. 7 1
618 140.38 atmosphere 995.0 90 > th dose independent rect. 8 8
632 140.41 temperature 10.0 43200 > th dose independent rect. 9 9
642 140.46 atmosphere 995.0 90 > th dose independent rect. 16 16
651 140.47 wind 9.0 270 < th dose dependent rect. 18 9
653 140.48 temperature 10.0 90 > th dose independent rect. 8 8
654 140.48 atmosphere 1015.0 90 < th dose independent rect. 8 8
659 140.49 radiation 1.0 270 < th dose independent rect. 5 22
660 140.49 wind 5.0 270 < th dose dependent rect. 4 1
666 140.50 wind 9.0 90 < th dose dependent rect. 8 9
670 140.51 atmosphere 995.0 10 > th dose independent rect. 9 7
686 140.54 precipitation 0.1 90 < th dose independent rect. 8 9
688 140.54 precipitation 0.1 90 < th dose dependent rect. 8 9
715 140.59 temperature 10.0 10 > th dose independent rect. 9 7
717 140.59 atmosphere 1015.0 10 < th dose independent rect. 9 7
718 140.59 precipitation 0.1 10 < th dose independent rect. 9 7
719 140.59 wind 1.0 270 > th dose independent rect. 6 8
720 140.59 wind 9.0 10 < th dose independent rect. 16 17
721 140.59 temperature 10.0 10 > th dose independent rect. 16 17
724 140.59 radiation 1.0 43200 < th dose dependent rect. 24 4
725 140.59 precipitation 0.1 10 < th dose dependent rect. 9 7
744 140.64 atmosphere 995.0 10 > th dose independent rect. 16 17
746 140.64 temperature 10.0 10 > th dose dependent rect. 9 7
819 140.75 wind 9.0 10 < th dose independent rect. 9 7
831 140.77 wind 1.0 270 > th dose independent rect. 9 16
840 140.79 atmosphere 1005.0 30 > th dose dependent rect. 7 1
842 140.80 temperature 10.0 270 > th dose independent rect. 13 9
844 140.80 temperature 10.0 270 > th dose independent rect. 22 15
845 140.80 atmosphere 995.0 270 > th dose independent rect. 22 15
856 140.82 radiation 1.0 30 > th dose independent sin 9 NA
859 140.82 wind 9.0 270 < th dose dependent rect. 3 3
864 140.83 wind 9.0 270 < th dose independent rect. 22 15
883 140.84 wind 9.0 270 < th dose independent rect. 13 9
910 140.88 wind 9.0 30 < th dose independent rect. 14 19
915 140.89 temperature 10.0 1440 > th dose independent rect. 10 5
925 140.89 temperature 10.0 1440 > th dose independent rect. 15 19
928 140.89 precipitation 0.1 270 < th dose independent rect. 6 21
930 140.89 precipitation 0.1 270 < th dose dependent rect. 6 21
931 140.90 temperature 10.0 30 > th dose independent rect. 9 5
933 140.90 atmosphere 995.0 30 > th dose independent rect. 9 5
934 140.90 atmosphere 1015.0 30 < th dose independent rect. 9 5
935 140.90 precipitation 0.1 30 < th dose independent rect. 9 5
940 140.90 temperature 10.0 30 > th dose independent rect. 14 19
941 140.90 precipitation 0.1 30 < th dose dependent rect. 9 5
954 140.93 atmosphere 995.0 270 > th dose independent rect. 14 16
956 140.94 temperature 20.0 270 > th dose independent rect. 6 8
972 140.96 wind 9.0 10 < th dose independent rect. 9 5
985 140.99 precipitation 0.1 270 < th dose independent rect. 14 16
986 140.99 precipitation 0.1 270 < th dose dependent rect. 14 16
987 141.00 wind 5.0 270 < th dose independent rect. 9 1
996 141.01 temperature 10.0 270 > th dose dependent rect. 6 8