Os04g0638100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0638100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transferase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.7 | 0.561 | 8.98 | -1.64 | 0.176 | 1.56 | 1.56 | -0.0748 | 0.0879 | 7.4 | 75.99 | 1314 | -- | -- |
| 142.7 | 0.556 | 8.98 | -1.63 | 0.177 | 1.56 | 1.56 | -- | 0.0897 | 7.41 | 76 | 1312 | -- | -- |
| 149.37 | 0.569 | 8.98 | -1.6 | 0.178 | 1.55 | -- | -0.0641 | 0.0845 | 7.22 | 75.97 | 1316 | -- | -- |
| 149.37 | 0.569 | 8.98 | -1.59 | 0.176 | 1.55 | -- | -- | 0.0865 | 7.07 | 75.98 | 1321 | -- | -- |
| 150.98 | 0.572 | 8.98 | -1.6 | -- | 1.56 | -- | -0.0655 | 0.0857 | -- | 75.88 | 1323 | -- | -- |
| 186.26 | 0.64 | 8.94 | -1.44 | 0.244 | -- | 1.62 | -- | 0.229 | 6.34 | -- | -- | -- | -- |
| 191.96 | 0.649 | 8.95 | -1.42 | 0.277 | -- | -- | -- | 0.222 | 4.77 | -- | -- | -- | -- |
| 150.99 | 0.572 | 8.98 | -1.59 | -- | 1.56 | -- | -- | 0.0883 | -- | 75.9 | 1323 | -- | -- |
| 208.86 | 0.673 | 8.93 | -- | 0.193 | 1.74 | -- | -- | 0.26 | 6.02 | 83.91 | 1420 | -- | -- |
| 196.01 | 0.654 | 8.95 | -1.41 | -- | -- | -- | -- | 0.229 | -- | -- | -- | -- | -- |
| 245.18 | 0.732 | 8.91 | -- | 0.251 | -- | -- | -- | 0.38 | 4.94 | -- | -- | -- | -- |
| 210.19 | 0.675 | 8.93 | -- | -- | 1.65 | -- | -- | 0.281 | -- | 84 | 1417 | -- | -- |
| 248.49 | 0.736 | 8.92 | -- | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 2 | 141.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 3 | 142.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 4 | 142.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 9 | 142.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 10 | 142.86 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 16 | 143.25 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 28 | 143.53 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 33 | 143.65 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 57 | 144.21 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 78 | 144.59 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 83 | 144.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 107 | 145.00 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 110 | 145.01 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 115 | 145.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 129 | 145.16 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 151 | 145.29 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 307 | 146.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 321 | 146.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 330 | 146.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 396 | 146.41 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 518 | 146.81 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 534 | 146.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 545 | 146.93 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 589 | 147.06 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 599 | 147.09 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 605 | 147.11 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 606 | 147.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 611 | 147.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 613 | 147.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 620 | 147.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 630 | 147.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 633 | 147.20 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 637 | 147.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 640 | 147.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 643 | 147.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 691 | 147.45 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 744 | 147.63 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 768 | 147.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 795 | 147.70 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 809 | 147.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |