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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0636500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0415) R2 : 0.0035
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.11 (0.0873) R2dN8 : 0.00451 R2N8 : 0.0035
σ : 0.781
deviance : 279.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
266.89 0.768 2.86 0.23 0.135 -0.781 -0.735 3.58 -0.128 3.41 49.72 4213 -- --
273.19 0.77 2.97 0.171 0.152 -0.386 -0.563 -- -0.182 3.29 57.78 1072 -- --
267.97 0.762 2.86 0.242 0.159 -0.778 -- 3.48 -0.124 0.74 49.49 4212 -- --
273.01 0.77 2.96 0.189 0.199 -0.423 -- -- -0.173 0.51 57.28 1072 -- --
269.41 0.764 2.86 0.281 -- -0.815 -- 3.59 -0.133 -- 50 4178 -- --
277.72 0.781 2.95 0.0999 0.0812 -- -0.774 -- -0.105 4.57 -- -- -- --
278.49 0.781 2.95 0.103 0.135 -- -- -- -0.101 0.59 -- -- -- --
275.56 0.773 2.96 0.169 -- -0.365 -- -- -0.168 -- 58 1072 -- --
273.9 0.771 2.97 -- 0.2 -0.42 -- -- -0.181 0.439 57.86 1071 -- --
279.63 0.781 2.95 0.108 -- -- -- -- -0.0985 -- -- -- -- --
278.77 0.781 2.95 -- 0.136 -- -- -- -0.112 0.627 -- -- -- --
276.36 0.774 2.96 -- -- -0.334 -- -- -0.176 -- 57.31 1072 -- --
279.94 0.781 2.95 -- -- -- -- -- -0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 252.43 atmosphere 1010.0 90 > th dose independent rect. 24 9
7 252.53 atmosphere 1010.0 90 > th dose independent rect. 8 1
8 252.53 atmosphere 1010.0 10 > th dose independent rect. 9 1
62 258.96 atmosphere 1005.0 10 < th dose independent rect. 20 1
64 259.03 wind 7.0 1440 > th dose independent rect. 3 1
65 259.03 wind 7.0 1440 > th dose dependent rect. 3 1
74 259.50 wind 1.0 10 < th dose dependent rect. 22 5
83 259.82 wind 1.0 10 < th dose dependent rect. 24 3
89 260.09 wind 1.0 90 < th dose dependent rect. 9 1
96 260.23 atmosphere 1005.0 10 < th dose independent rect. 18 4
135 261.28 wind 7.0 4320 > th dose dependent rect. 21 1
137 261.86 wind 1.0 90 < th dose independent rect. 8 2
138 261.94 wind 7.0 4320 > th dose dependent rect. 21 5
146 262.44 atmosphere 1005.0 10 > th dose dependent rect. 9 1
151 262.63 radiation 20.0 720 < th dose dependent rect. 16 1
152 262.69 wind 7.0 4320 > th dose independent rect. 21 5
153 262.70 wind 1.0 10 < th dose independent rect. 24 2
158 262.80 wind 7.0 4320 < th dose independent rect. 21 5
162 262.86 radiation 40.0 720 < th dose dependent rect. 16 9
168 263.11 wind 1.0 10 < th dose independent rect. 22 4
170 263.27 wind 5.0 4320 < th dose independent rect. 24 1
172 263.33 temperature 30.0 10 < th dose dependent rect. 16 19
173 263.35 precipitation 0.1 720 > th dose independent rect. 17 1
187 263.59 wind 1.0 10 < th dose dependent rect. 6 21
189 263.64 wind 1.0 10 < th dose independent rect. 15 11
195 263.69 temperature 30.0 720 < th dose independent rect. 17 1
196 263.69 temperature 30.0 90 < th dose dependent rect. 15 19
197 263.72 temperature 20.0 1440 > th dose dependent rect. 18 9
207 263.87 temperature 30.0 720 < th dose dependent rect. 17 1
209 263.90 temperature 20.0 1440 > th dose dependent rect. 1 1
218 263.98 temperature 30.0 270 < th dose dependent rect. 15 3
226 264.09 temperature 20.0 1440 > th dose dependent rect. 23 3
229 264.10 radiation 10.0 720 < th dose independent rect. 16 2
277 264.36 wind 1.0 10 < th dose dependent sin 17 NA
290 264.44 temperature 20.0 1440 > th dose dependent rect. 19 2
304 264.51 wind 7.0 4320 > th dose independent rect. 21 1
312 264.57 temperature 20.0 10 < th dose dependent rect. 3 1
317 264.59 wind 7.0 4320 > th dose dependent rect. 23 3
325 264.64 temperature 25.0 270 < th dose independent rect. 14 4
332 264.68 humidity 50.0 4320 > th dose independent rect. 13 1
343 264.78 temperature 30.0 90 < th dose independent rect. 16 18
361 264.90 wind 7.0 4320 < th dose independent rect. 21 1
362 264.90 radiation 20.0 720 < th dose independent rect. 15 10
380 265.04 precipitation 0.1 720 > th dose dependent rect. 17 1
389 265.12 temperature 25.0 4320 < th dose dependent rect. 1 1
394 265.16 temperature 20.0 1440 > th dose independent rect. 3 1
395 265.16 temperature 20.0 1440 > th dose dependent sin 12 NA
397 265.19 atmosphere 995.0 43200 < th dose independent rect. 15 1
406 265.22 atmosphere 995.0 43200 > th dose independent rect. 14 4
407 265.22 atmosphere 995.0 43200 > th dose independent rect. 14 7
409 265.22 atmosphere 995.0 43200 < th dose dependent rect. 15 3
413 265.23 atmosphere 1015.0 4320 > th dose independent rect. 10 1
422 265.25 atmosphere 995.0 43200 > th dose independent rect. 15 1
423 265.25 atmosphere 1015.0 4320 < th dose independent rect. 11 1
425 265.25 atmosphere 995.0 43200 < th dose independent rect. 14 5
451 265.35 atmosphere 1015.0 4320 > th dose dependent rect. 10 1
466 265.42 humidity 50.0 4320 > th dose independent rect. 13 4
478 265.45 temperature 30.0 10 < th dose dependent rect. 16 13
518 265.55 atmosphere 1015.0 4320 > th dose dependent rect. 10 11
540 265.59 temperature 30.0 10 < th dose dependent rect. 16 4
541 265.59 atmosphere 1015.0 4320 > th dose dependent rect. 10 7
552 265.61 atmosphere 1015.0 4320 < th dose independent rect. 14 3
567 265.63 precipitation 0.1 43200 > th dose dependent rect. 20 3
591 265.68 temperature 20.0 1440 < th dose independent rect. 3 1
638 265.76 atmosphere 1015.0 4320 < th dose independent rect. 19 1
656 265.80 atmosphere 1015.0 4320 > th dose independent rect. 13 4
662 265.81 atmosphere 1015.0 4320 > th dose independent rect. 13 2
674 265.82 temperature 25.0 1440 < th dose independent rect. 20 1
884 266.12 precipitation 0.1 43200 > th dose independent rect. 20 2
894 266.13 atmosphere 995.0 43200 < th dose dependent rect. 14 10
897 266.14 humidity 50.0 4320 < th dose independent rect. 12 5
915 266.18 precipitation 0.1 43200 < th dose independent rect. 20 2
917 266.18 precipitation 0.1 43200 < th dose dependent rect. 20 2
920 266.18 temperature 30.0 10 < th dose dependent rect. 15 7
944 266.23 humidity 50.0 4320 > th dose independent rect. 12 11
951 266.24 humidity 50.0 4320 > th dose independent rect. 12 9
953 266.24 humidity 50.0 4320 > th dose independent rect. 12 21
954 266.24 temperature 20.0 1440 > th dose dependent rect. 5 1
970 266.27 atmosphere 1015.0 4320 < th dose independent rect. 16 4
982 266.28 humidity 50.0 4320 > th dose independent rect. 12 16