Os04g0636100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os04g0636100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.72 | 0.363 | 9.11 | 0.197 | 0.416 | 0.392 | -0.714 | -0.225 | -0.015 | 8.7 | 24.3 | 185 | -- | -- |
| 59.95 | 0.361 | 9.11 | 0.143 | 0.417 | 0.393 | -0.723 | -- | -0.0133 | 8.64 | 24.2 | 189 | -- | -- |
| 61.32 | 0.365 | 9.11 | 0.184 | 0.414 | 0.402 | -- | -0.239 | -0.0137 | 9.07 | 24.27 | 189 | -- | -- |
| 61.52 | 0.365 | 9.12 | 0.105 | 0.411 | 0.395 | -- | -- | -0.0348 | 9.04 | 24.29 | 189 | -- | -- |
| 66.18 | 0.379 | 9.11 | 0.373 | -- | 0.575 | -- | -0.873 | 0.0624 | -- | 24.8 | 520 | -- | -- |
| 68.75 | 0.389 | 9.17 | -0.0161 | 0.496 | -- | -0.834 | -- | -0.233 | 7.55 | -- | -- | -- | -- |
| 70.67 | 0.394 | 9.16 | -0.0354 | 0.495 | -- | -- | -- | -0.231 | 7.68 | -- | -- | -- | -- |
| 67.9 | 0.384 | 9.13 | 0.13 | -- | 0.532 | -- | -- | 0.00108 | -- | 24.71 | 492 | -- | -- |
| 61.79 | 0.366 | 9.13 | -- | 0.416 | 0.378 | -- | -- | -0.0526 | 8.96 | 24.25 | 188 | -- | -- |
| 83.86 | 0.428 | 9.18 | -0.0289 | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
| 70.71 | 0.393 | 9.16 | -- | 0.495 | -- | -- | -- | -0.228 | 7.69 | -- | -- | -- | -- |
| 68.33 | 0.385 | 9.13 | -- | -- | 0.516 | -- | -- | -0.0224 | -- | 24.83 | 496 | -- | -- |
| 83.88 | 0.427 | 9.18 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 58.20 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 3 | 58.26 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 8 | 58.27 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 9 | 58.27 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 24 | 58.31 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 38 | 58.40 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 42 | 58.42 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 60 | 58.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 64 | 58.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 65 | 58.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 67 | 58.54 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 68 | 58.54 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 70 | 58.55 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 71 | 58.55 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 73 | 58.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 74 | 58.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 78 | 58.56 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 80 | 58.56 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 82 | 58.58 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 85 | 58.58 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 88 | 58.59 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 111 | 58.62 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 18 |
| 113 | 58.63 | humidity | 50.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 127 | 58.63 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 136 | 58.64 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 237 | 58.67 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 247 | 58.68 | humidity | 50.0 | 43200 | > th | dose independent | no | NA | NA |
| 306 | 58.68 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 308 | 58.68 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 323 | 58.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 338 | 58.73 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 387 | 58.81 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 395 | 58.82 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 399 | 58.82 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 454 | 58.86 | humidity | 50.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 489 | 58.87 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 571 | 58.88 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 621 | 58.90 | humidity | 50.0 | 43200 | < th | dose independent | no | NA | NA |
| 645 | 58.90 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 656 | 58.90 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 660 | 58.90 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 691 | 58.92 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 715 | 58.93 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 796 | 58.98 | radiation | 30.0 | 43200 | < th | dose independent | sin | 23 | NA |