Os04g0634900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0634900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.63 | 0.535 | 2.87 | 0.0122 | 0.0989 | 2.2 | -0.156 | -8.04 | 0.0957 | 14.9 | 92.77 | 295 | 13.7 | -- |
| 148.04 | 0.567 | 2.85 | -0.165 | 0.12 | 1.89 | 0.651 | -- | 0.0526 | 12.3 | 93.62 | 234 | 13.1 | -- |
| 129.59 | 0.53 | 2.87 | 0.00538 | 0.11 | 2.18 | -- | -7.71 | 0.0969 | 13.9 | 92.75 | 288 | 13.5 | -- |
| 149.55 | 0.57 | 2.86 | -0.145 | 0.106 | 1.62 | -- | -- | 0.0344 | 12.8 | 93.71 | 234 | 12.9 | -- |
| 130.21 | 0.531 | 2.87 | -0.00307 | -- | 2.07 | -- | -7.66 | 0.0891 | -- | 92.75 | 292 | 13.6 | -- |
| 158.59 | 0.59 | 2.87 | -0.134 | 0.00501 | -- | -0.545 | -- | -0.0178 | 0.783 | -- | -- | -- | -- |
| 159.83 | 0.592 | 2.87 | -0.114 | 0.018 | -- | -- | -- | -0.0153 | 5.31 | -- | -- | -- | -- |
| 150.16 | 0.571 | 2.86 | -0.156 | -- | 1.46 | -- | -- | 0.0351 | -- | 93.77 | 234 | 12.9 | -- |
| 150.11 | 0.571 | 2.85 | -- | 0.091 | 1.54 | -- | -- | 0.0591 | 13.4 | 93.72 | 234 | 12.8 | -- |
| 159.85 | 0.591 | 2.87 | -0.113 | -- | -- | -- | -- | -0.0148 | -- | -- | -- | -- | -- |
| 160.18 | 0.592 | 2.87 | -- | 0.0161 | -- | -- | -- | -0.0026 | 5.58 | -- | -- | -- | -- |
| 150.79 | 0.572 | 2.86 | -- | -- | 1.43 | -- | -- | 0.0512 | -- | 93.79 | 234 | 12.9 | -- |
| 160.19 | 0.591 | 2.87 | -- | -- | -- | -- | -- | -0.00227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.80 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 2 | 135.12 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 36 | 139.77 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 45 | 140.64 | humidity | 90.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 55 | 141.23 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 23 | 3 |
| 77 | 141.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 82 | 142.25 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 96 | 142.93 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 99 | 143.05 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 117 | 143.50 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 122 | 143.71 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 133 | 143.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 136 | 144.06 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 224 | 145.89 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 227 | 145.91 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 12 |
| 243 | 146.05 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 3 |
| 248 | 146.18 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 276 | 146.66 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 290 | 146.89 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 9 |
| 310 | 146.89 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 355 | 147.20 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 400 | 147.46 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 421 | 147.47 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 424 | 147.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 458 | 147.51 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 572 | 147.63 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 751 | 147.81 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 753 | 147.81 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 810 | 147.92 | radiation | 1.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 820 | 147.98 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 844 | 148.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 845 | 148.04 | radiation | 1.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 849 | 148.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 937 | 148.19 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 943 | 148.21 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 23 | 4 |
| 962 | 148.26 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 985 | 148.36 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 998 | 148.40 | wind | 1.0 | 10 | > th | dose independent | rect. | 1 | 1 |