FiT-DB / Search/ Help/ Sample detail
Os04g0633300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Curculin-like (mannose-binding) lectin domain containing protein.
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
391.5 | 0.93 | 3.07 | 0.26 | 0.188 | 4.24 | -1.35 | 8.97 | -0.128 | 3.65 | 7.063 | 10 | -- | -- |
406.82 | 0.939 | 3 | 0.338 | 0.116 | 2.74 | -1.5 | -- | 0.000124 | 3.21 | 7.604 | 10 | -- | -- |
396.59 | 0.928 | 3.07 | 0.277 | 0.159 | 4.29 | -- | 9.99 | -0.113 | 3.04 | 7.138 | 10 | -- | -- |
412.29 | 0.946 | 3.02 | 0.176 | 0.137 | 1.76 | -- | -- | -0.118 | 2.83 | 7.6 | 10 | -- | -- |
397.99 | 0.929 | 3.07 | 0.247 | -- | 4.23 | -- | 10.2 | -0.121 | -- | 7.257 | 10 | -- | -- |
418 | 0.958 | 3.04 | 0.0116 | 0.0543 | -- | -1.22 | -- | -0.18 | 2.99 | -- | -- | -- | -- |
423.01 | 0.963 | 3.04 | 0.0386 | 0.0493 | -- | -- | -- | -0.172 | 2.65 | -- | -- | -- | -- |
413.31 | 0.947 | 3.02 | 0.177 | -- | 1.66 | -- | -- | -0.118 | -- | 7.6 | 10 | -- | -- |
413.08 | 0.947 | 3.03 | -- | 0.133 | 1.65 | -- | -- | -0.135 | 2.95 | 7.6 | 10 | -- | -- |
423.15 | 0.961 | 3.04 | 0.0407 | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
423.04 | 0.962 | 3.04 | -- | 0.0501 | -- | -- | -- | -0.177 | 2.66 | -- | -- | -- | -- |
414.07 | 0.948 | 3.03 | -- | -- | 1.55 | -- | -- | -0.139 | -- | 7.6 | 10 | -- | -- |
423.19 | 0.96 | 3.04 | -- | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 380.51 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 19 |
3 | 384.19 | wind | 9 | 90 | > th | dose independent | rect. | 16 | 19 |
4 | 384.85 | wind | 7 | 30 | > th | dose dependent | rect. | 9 | 1 |
8 | 385.49 | wind | 7 | 30 | > th | dose independent | rect. | 9 | 1 |
42 | 387.12 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 19 |
61 | 388.43 | wind | 7 | 10 | > th | dose dependent | rect. | 9 | 10 |
145 | 389.92 | wind | 7 | 10 | > th | dose dependent | rect. | 14 | 22 |
160 | 390.71 | wind | 9 | 10 | > th | dose dependent | sin | 16 | NA |
166 | 391.09 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 21 |
224 | 391.52 | wind | 7 | 10 | > th | dose dependent | no | NA | NA |
264 | 392.09 | wind | 7 | 10 | > th | dose dependent | rect. | 11 | 23 |
267 | 392.28 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 19 |
273 | 392.47 | wind | 7 | 10 | > th | dose dependent | sin | 21 | NA |
301 | 393.44 | wind | 7 | 10 | > th | dose independent | rect. | 9 | 10 |
317 | 393.85 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 1 |
321 | 393.86 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 1 |
336 | 394.00 | wind | 9 | 90 | > th | dose dependent | sin | 10 | NA |
357 | 394.24 | wind | 9 | 90 | > th | dose independent | sin | 11 | NA |
361 | 394.30 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 11 |
387 | 394.51 | wind | 7 | 10 | > th | dose independent | sin | 1 | NA |
393 | 394.59 | radiation | 10 | 90 | < th | dose dependent | rect. | 8 | 1 |
399 | 394.59 | wind | 7 | 90 | > th | dose dependent | rect. | 23 | 20 |
447 | 395.10 | wind | 9 | 10 | > th | dose dependent | sin | 10 | NA |
489 | 395.35 | wind | 9 | 90 | > th | dose independent | sin | 18 | NA |
502 | 395.51 | wind | 9 | 90 | < th | dose independent | sin | 11 | NA |
558 | 395.91 | wind | 7 | 10 | < th | dose independent | sin | 22 | NA |
560 | 395.92 | wind | 9 | 90 | < th | dose independent | sin | 20 | NA |
564 | 395.96 | wind | 9 | 90 | < th | dose independent | no | NA | NA |
596 | 396.02 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
628 | 396.15 | wind | 9 | 90 | > th | dose independent | rect. | 9 | 9 |
646 | 396.17 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 17 |
659 | 396.20 | wind | 7 | 90 | > th | dose independent | rect. | 23 | 12 |
665 | 396.22 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 20 |
756 | 396.38 | radiation | 10 | 90 | < th | dose independent | rect. | 8 | 1 |
825 | 396.61 | wind | 7 | 90 | > th | dose dependent | no | NA | NA |
975 | 396.85 | wind | 9 | 90 | > th | dose independent | no | NA | NA |