Os04g0633200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os04g0633200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.87 | 0.529 | 7.64 | 0.983 | 0.576 | 2.84 | 0.304 | 1.02 | 0.691 | 0.282 | 0.8301 | 1443 | -- | -- |
| 127.69 | 0.526 | 7.64 | 0.883 | 0.608 | 2.69 | 0.312 | -- | 0.689 | 0.267 | 0.84 | 1447 | -- | -- |
| 127.24 | 0.525 | 7.64 | 0.968 | 0.586 | 2.85 | -- | 0.988 | 0.695 | 0.248 | 0.836 | 1445 | -- | -- |
| 127.89 | 0.527 | 7.66 | 0.843 | 0.637 | 2.76 | -- | -- | 0.666 | 0.242 | 0.8365 | 1450 | -- | -- |
| 131.73 | 0.535 | 7.63 | 0.944 | -- | 2.85 | -- | 1.06 | 0.7 | -- | 0.7569 | 1385 | -- | -- |
| 215.25 | 0.688 | 7.57 | 1.43 | 0.534 | -- | 0.553 | -- | 1.03 | 0.604 | -- | -- | -- | -- |
| 216.56 | 0.689 | 7.57 | 1.4 | 0.532 | -- | -- | -- | 1.03 | 0.557 | -- | -- | -- | -- |
| 133.36 | 0.538 | 7.65 | 0.82 | -- | 2.73 | -- | -- | 0.676 | -- | 0.76 | 1382 | -- | -- |
| 142.86 | 0.557 | 7.67 | -- | 0.667 | 3.19 | -- | -- | 0.548 | 0.375 | 0.6712 | 1455 | -- | -- |
| 234.34 | 0.715 | 7.56 | 1.42 | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
| 268.57 | 0.767 | 7.61 | -- | 0.554 | -- | -- | -- | 0.874 | 0.681 | -- | -- | -- | -- |
| 148.82 | 0.568 | 7.67 | -- | -- | 3.03 | -- | -- | 0.544 | -- | 0.71 | 1388 | -- | -- |
| 287.78 | 0.792 | 7.6 | -- | -- | -- | -- | -- | 0.882 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.55 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 5 | 121.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 9 | 122.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 24 | 123.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 33 | 124.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 43 | 125.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 51 | 126.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 52 | 126.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 56 | 126.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 57 | 126.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 79 | 127.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 85 | 127.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 87 | 127.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 92 | 127.08 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 93 | 127.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 143 | 127.72 | radiation | 1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 149 | 127.97 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 161 | 128.08 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 212 | 128.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 213 | 128.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 215 | 128.50 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 216 | 128.50 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 229 | 128.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 231 | 128.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 237 | 128.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 238 | 128.61 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 252 | 128.64 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 303 | 129.31 | radiation | 1 | 1440 | > th | dose independent | sin | 0 | NA |
| 323 | 129.96 | radiation | 1 | 1440 | < th | dose independent | sin | 0 | NA |
| 327 | 130.08 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 328 | 130.12 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 394 | 132.19 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 404 | 132.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 406 | 132.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 408 | 132.87 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 411 | 132.90 | radiation | 1 | 1440 | > th | dose independent | sin | 13 | NA |
| 412 | 132.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 418 | 132.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 475 | 133.54 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 485 | 133.64 | radiation | 1 | 1440 | < th | dose independent | sin | 13 | NA |
| 489 | 133.73 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 493 | 133.80 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 505 | 134.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 531 | 134.33 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 536 | 134.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 578 | 134.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 589 | 134.92 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 614 | 135.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 631 | 135.24 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 649 | 135.38 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 653 | 135.39 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 662 | 135.46 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 663 | 135.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 698 | 135.62 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 711 | 135.67 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 727 | 135.71 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 738 | 135.74 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 740 | 135.75 | temperature | 25 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 745 | 135.76 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 758 | 135.79 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 770 | 135.83 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 771 | 135.83 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 775 | 135.84 | temperature | 25 | 14400 | > th | dose independent | sin | 17 | NA |
| 780 | 135.84 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 839 | 135.96 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 913 | 136.10 | temperature | 25 | 14400 | > th | dose independent | sin | 3 | NA |
| 915 | 136.10 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 938 | 136.15 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 948 | 136.16 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 949 | 136.17 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 973 | 136.20 | temperature | 20 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 977 | 136.21 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 23 |