Os04g0632700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os04g0632700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.77 | 0.726 | 9.93 | 2.32 | 2.07 | -1.91 | 0.592 | 0.595 | 0.595 | 10.5 | 20.2 | 1623 | -- | -- |
| 239.19 | 0.72 | 9.95 | 2.18 | 2.06 | -1.92 | 0.685 | -- | 0.543 | 10.5 | 20.3 | 1515 | -- | -- |
| 240.21 | 0.722 | 9.92 | 2.35 | 2.07 | -1.91 | -- | 0.606 | 0.599 | 10.5 | 20.2 | 1622 | -- | -- |
| 240.81 | 0.723 | 9.94 | 2.24 | 2.06 | -1.98 | -- | -- | 0.579 | 10.5 | 20.3 | 1547 | -- | -- |
| 459.33 | 0.998 | 9.95 | 2.48 | -- | -1.95 | -- | 0.963 | 0.705 | -- | 20.5 | 796 | -- | -- |
| 318.04 | 0.836 | 10 | 1.4 | 2.06 | -- | 0.777 | -- | 0.148 | 10.5 | -- | -- | -- | -- |
| 320.52 | 0.838 | 10 | 1.43 | 2.06 | -- | -- | -- | 0.15 | 10.6 | -- | -- | -- | -- |
| 457.09 | 0.996 | 9.99 | 2.16 | -- | -2.04 | -- | -- | 0.596 | -- | 20.51 | 792 | -- | -- |
| 337.45 | 0.86 | 10 | -- | 2.22 | -0.921 | -- | -- | 0.138 | 10.7 | 20.3 | 1547 | -- | -- |
| 581.4 | 1.13 | 10.1 | 1.39 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 374.36 | 0.905 | 10.1 | -- | 2.05 | -- | -- | -- | -0.00876 | 10.5 | -- | -- | -- | -- |
| 519.64 | 1.06 | 10.1 | -- | -- | -1.52 | -- | -- | 0.38 | -- | 25.3 | 764 | -- | -- |
| 632.52 | 1.17 | 10.1 | -- | -- | -- | -- | -- | -0.0134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.14 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 2 | 230.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 3 | 230.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 4 | 230.77 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 7 | 231.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 8 | 231.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 14 | 232.09 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 15 | 232.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 18 | 232.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 19 | 232.32 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 20 | 232.32 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 31 | 233.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 43 | 233.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 56 | 233.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 58 | 233.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 77 | 234.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 85 | 234.58 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 112 | 234.95 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 203 | 236.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 224 | 237.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 247 | 237.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 435 | 240.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 531 | 241.38 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 541 | 241.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 555 | 241.93 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 567 | 242.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 605 | 243.28 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 624 | 243.64 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 652 | 244.21 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 654 | 244.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 655 | 244.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 668 | 244.52 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 686 | 244.95 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 726 | 245.86 | humidity | 90 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 727 | 245.87 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 23 |
| 732 | 245.96 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 752 | 246.40 | humidity | 50 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 805 | 247.18 | humidity | 90 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 829 | 247.62 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 846 | 247.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 866 | 248.01 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 23 |
| 932 | 248.93 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 933 | 248.93 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 13 |
| 952 | 249.22 | temperature | 20 | 4320 | < th | dose independent | sin | 18 | NA |
| 953 | 249.23 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 14 |
| 969 | 249.40 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 18 | NA |
| 986 | 249.69 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 999 | 249.84 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 12 |