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Os04g0630800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Anthocyanidin reductase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.66 (0.0619) R2 : 0.611
β1 : 4.82 (0.232) R2dD : 0.398 R2D : 0.182
β2 : 1.32 (0.156) R2dC : 0.0586 R2C : 0.0675
β3 : 4.36 (0.248) R2dE : 0.271 R2E : 0.152
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.997 (0.132) R2dN8 : 0.0627 R2N8 : 0.0122
σ : 1.16
deviance : 616.43
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C
peak time of C : 20.6
E
wheather : humidity
threshold : 58.92
memory length : 1398
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.3
open length of G : 2.04

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
602.1 1.15 6.63 4.87 1.3 4.33 2.24 -0.000526 1.04 20.5 59.57 1397 11.1 2.13
601.55 1.14 6.64 4.9 1.31 4.34 2.3 -- 1.05 20.5 59.31 1397 11.2 2.15
617.32 1.16 6.65 4.78 1.29 4.33 -- 0.437 1.03 20.7 59.68 1398 11.2 2.11
616.43 1.16 6.66 4.82 1.32 4.36 -- -- 0.997 20.6 58.92 1398 11.3 2.04
685.7 1.22 6.62 4.74 -- 4.53 -- 0.601 0.968 -- 59.15 1279 11.3 2.08
1007.49 1.49 6.63 3.96 1.53 -- 1.74 -- 1.07 20.8 -- -- -- --
1016.96 1.49 6.63 3.9 1.52 -- -- -- 1.07 21 -- -- -- --
685.06 1.22 6.63 4.73 -- 4.44 -- -- 0.866 -- 58.31 1281 11.4 1.98
1153.9 1.58 6.69 -- 1.35 3.3 -- -- 0.775 21.1 62 1384 11.5 2.9
1149.99 1.58 6.59 3.9 -- -- -- -- 1.06 -- -- -- -- --
1418.14 1.76 6.73 -- 1.52 -- -- -- 0.635 21.2 -- -- -- --
1138.81 1.57 6.68 -- -- 4.08 -- -- 0.325 -- 48.81 2457 12.1 3.35
1551.95 1.84 6.69 -- -- -- -- -- 0.627 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 606.75 humidity 80 1440 < th dose independent rect. 7 8
8 612.10 humidity 80 1440 > th dose independent rect. 6 10
23 618.64 humidity 60 1440 > th dose dependent rect. 11 2
24 619.09 humidity 80 1440 < th dose independent sin 1 NA
36 622.42 humidity 80 1440 > th dose independent sin 1 NA
42 623.64 humidity 60 1440 > th dose dependent sin 0 NA
50 625.16 humidity 50 1440 > th dose dependent rect. 4 13
51 625.19 humidity 60 1440 > th dose dependent rect. 6 13
112 629.68 humidity 90 1440 < th dose dependent rect. 4 13
135 630.62 humidity 90 1440 < th dose dependent sin 1 NA
188 633.29 humidity 60 1440 > th dose dependent rect. 9 6
361 641.11 humidity 70 1440 > th dose independent rect. 18 22
388 642.11 humidity 70 1440 > th dose independent rect. 18 20
465 645.36 humidity 90 1440 < th dose dependent rect. 11 3
605 649.35 humidity 80 1440 < th dose dependent rect. 16 23
650 650.62 humidity 50 1440 > th dose dependent no NA NA
667 651.08 humidity 80 1440 < th dose dependent rect. 18 21
671 651.15 humidity 90 1440 < th dose dependent no NA NA
703 651.86 humidity 70 1440 > th dose independent rect. 15 23
704 651.86 humidity 50 1440 > th dose dependent rect. 9 23
770 652.74 humidity 90 1440 < th dose dependent rect. 9 23
786 652.95 humidity 70 1440 > th dose independent rect. 9 23
825 653.34 humidity 70 1440 > th dose independent rect. 2 23
835 653.38 humidity 70 1440 > th dose independent rect. 6 23
840 653.40 humidity 70 1440 > th dose independent rect. 4 23
842 653.41 humidity 70 1440 > th dose independent no NA NA
854 653.48 humidity 70 1440 > th dose independent rect. 6 21
858 653.50 humidity 70 1440 > th dose independent rect. 6 19
863 653.52 humidity 70 1440 > th dose independent rect. 13 23
914 654.27 humidity 70 1440 > th dose independent rect. 9 20
916 654.28 humidity 80 1440 < th dose dependent rect. 13 23
928 654.38 humidity 70 1440 > th dose independent rect. 9 18
929 654.39 humidity 70 1440 > th dose independent rect. 9 16