Os04g0628600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0628600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.3 | 0.19 | 8.98 | 0.457 | 0.54 | 0.408 | -0.202 | 0.833 | 0.207 | 3.92 | 21.69 | 1533 | -- | -- |
| 18.09 | 0.198 | 9.01 | 0.25 | 0.546 | 0.383 | 0.0284 | -- | 0.164 | 3.76 | 21.8 | 1631 | -- | -- |
| 16.41 | 0.189 | 8.98 | 0.457 | 0.54 | 0.41 | -- | 0.832 | 0.208 | 3.91 | 21.67 | 1558 | -- | -- |
| 17.95 | 0.197 | 9 | 0.225 | 0.555 | 0.351 | -- | -- | 0.158 | 3.93 | 21.7 | 1428 | -- | -- |
| 31.27 | 0.26 | 8.98 | 0.569 | -- | 0.358 | -- | 1.05 | 0.234 | -- | 24.1 | 2629 | -- | -- |
| 21.92 | 0.219 | 8.98 | 0.376 | 0.546 | -- | -0.222 | -- | 0.262 | 3.92 | -- | -- | -- | -- |
| 22.06 | 0.22 | 8.98 | 0.379 | 0.544 | -- | -- | -- | 0.263 | 3.91 | -- | -- | -- | -- |
| 31.54 | 0.262 | 9.03 | 0.273 | -- | 0.432 | -- | -- | 0.109 | -- | 24.6 | 1144 | -- | -- |
| 19.01 | 0.203 | 9.01 | -- | 0.562 | 0.419 | -- | -- | 0.115 | 4.06 | 21.5 | 2054 | -- | -- |
| 38.3 | 0.289 | 8.99 | 0.402 | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
| 25.86 | 0.238 | 8.99 | -- | 0.552 | -- | -- | -- | 0.221 | 3.9 | -- | -- | -- | -- |
| 33.07 | 0.268 | 9.03 | -- | -- | 0.48 | -- | -- | 0.0655 | -- | 24.41 | 1169 | -- | -- |
| 42.56 | 0.305 | 9 | -- | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.76 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 4 | 16.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 5 | 16.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 7 | 16.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 9 | 16.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 12 | 16.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 22 | 16.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 28 | 16.91 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 29 | 16.92 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 37 | 16.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 45 | 16.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 46 | 16.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 48 | 16.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 55 | 16.94 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 56 | 16.94 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 58 | 16.94 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 70 | 16.95 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 77 | 16.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 87 | 16.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 95 | 16.97 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 108 | 16.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 115 | 16.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 131 | 16.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 148 | 17.00 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 150 | 17.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 153 | 17.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 167 | 17.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 194 | 17.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 322 | 17.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 377 | 17.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 379 | 17.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 4 | NA |
| 635 | 17.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 649 | 17.32 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 724 | 17.36 | temperature | 20 | 10 | > th | dose dependent | sin | 10 | NA |
| 745 | 17.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 746 | 17.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 829 | 17.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 942 | 17.44 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 954 | 17.45 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |