Os04g0627900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Translation initiation factor SUI1 domain containing protein.
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Os04g0627900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Translation initiation factor SUI1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 322.3 | 0.843 | 5.23 | -0.074 | 1.1 | -0.677 | 0.312 | -0.455 | 0.882 | 16.7 | 20.9 | 10 | -- | -- |
| 323.21 | 0.844 | 5.22 | 0.0229 | 1.1 | -0.656 | 0.0421 | -- | 0.903 | 16.8 | 20.8 | 10 | -- | -- |
| 322.39 | 0.843 | 5.23 | -0.0566 | 1.1 | -0.667 | -- | -0.374 | 0.886 | 16.8 | 20.9 | 10 | -- | -- |
| 323.21 | 0.843 | 5.22 | 0.0229 | 1.1 | -0.655 | -- | -- | 0.903 | 16.8 | 20.81 | 10 | -- | -- |
| 383.06 | 0.912 | 5.23 | -0.0629 | -- | -0.508 | -- | -0.174 | 0.817 | -- | 20.5 | 17 | -- | -- |
| 343.22 | 0.869 | 5.25 | -0.131 | 0.999 | -- | -0.188 | -- | 0.764 | 17.4 | -- | -- | -- | -- |
| 343.31 | 0.868 | 5.25 | -0.131 | 0.998 | -- | -- | -- | 0.764 | 17.4 | -- | -- | -- | -- |
| 383.03 | 0.912 | 5.22 | -0.0343 | -- | -0.515 | -- | -- | 0.836 | -- | 20.58 | 30 | -- | -- |
| 323.22 | 0.842 | 5.22 | -- | 1.1 | -0.652 | -- | -- | 0.9 | 16.8 | 20.8 | 10 | -- | -- |
| 395.19 | 0.929 | 5.24 | -0.165 | -- | -- | -- | -- | 0.739 | -- | -- | -- | -- | -- |
| 343.76 | 0.867 | 5.25 | -- | 1 | -- | -- | -- | 0.778 | 17.4 | -- | -- | -- | -- |
| 383.06 | 0.912 | 5.22 | -- | -- | -0.519 | -- | -- | 0.841 | -- | 20.57 | 30 | -- | -- |
| 395.9 | 0.929 | 5.24 | -- | -- | -- | -- | -- | 0.757 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.26 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 2 | 320.52 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 22 | 12 |
| 4 | 321.10 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 5 | 321.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 15 | 321.61 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 4 |
| 30 | 321.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 11 |
| 49 | 322.39 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 9 |
| 59 | 322.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 4 |
| 60 | 322.60 | temperature | 25.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 63 | 322.63 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 69 | 322.80 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 82 | 323.04 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 94 | 323.12 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 108 | 323.20 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 20 |
| 126 | 323.46 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 21 |
| 149 | 323.61 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 22 |
| 169 | 323.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 9 |
| 300 | 324.65 | temperature | 15.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 302 | 324.65 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 326 | 324.78 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 447 | 325.63 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 451 | 325.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 11 |
| 474 | 325.77 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 482 | 325.80 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 483 | 325.80 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 494 | 325.86 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 526 | 325.98 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 551 | 326.09 | temperature | 20.0 | 90 | < th | dose independent | rect. | 22 | 13 |
| 554 | 326.09 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 593 | 326.25 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 625 | 326.43 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 13 | 5 |
| 638 | 326.43 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 13 | 5 |
| 651 | 326.44 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 680 | 326.44 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 736 | 326.54 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 743 | 326.58 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 766 | 326.65 | temperature | 20.0 | 90 | < th | dose independent | rect. | 22 | 16 |
| 878 | 327.07 | temperature | 20.0 | 10 | > th | dose independent | sin | 9 | NA |
| 892 | 327.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 897 | 327.14 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 898 | 327.14 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 915 | 327.20 | wind | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 985 | 327.40 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 21 | NA |