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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0626300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.88 (0.0177) R2 : 0.00871
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0745 (0.0372) R2dN8 : 0.0112 R2N8 : 0.00871
σ : 0.333
deviance : 50.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49 0.329 2.89 0.0574 0.0781 0.616 -0.521 1.23 0.0836 4.78 9 10 -- --
49.79 0.329 2.88 0.0383 0.062 0.252 -0.547 -- 0.0807 4.16 9.202 15 -- --
49.24 0.327 2.89 0.0491 0.0784 0.756 -- 1.59 0.0872 5.78 9.298 6 -- --
49.62 0.328 2.88 0.0447 0.0818 0.284 -- -- 0.0831 6.89 9.293 5 -- --
49.55 0.328 2.88 0.0358 -- 0.725 -- 1.71 0.0832 -- 9.297 6 -- --
50.1 0.332 2.88 0.0171 0.0523 -- -0.48 -- 0.0732 4.38 -- -- -- --
50.46 0.333 2.88 0.022 0.0869 -- -- -- 0.0758 7.79 -- -- -- --
50.04 0.329 2.88 0.0464 -- 0.281 -- -- 0.0883 -- 9.271 5 -- --
49.66 0.328 2.88 -- 0.0904 0.277 -- -- 0.0816 7.1 9.224 5 -- --
50.86 0.333 2.88 0.0231 -- -- -- -- 0.077 -- -- -- -- --
50.47 0.332 2.88 -- 0.087 -- -- -- 0.0734 7.77 -- -- -- --
50.02 0.329 2.88 -- -- 0.355 -- -- 0.0814 -- 9.413 5 -- --
50.88 0.333 2.88 -- -- -- -- -- 0.0745 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.98 radiation 10.0 4320 < th dose dependent rect. 23 1
8 45.64 temperature 20.0 30 > th dose dependent rect. 2 1
9 45.66 atmosphere 1005.0 30 > th dose dependent rect. 2 1
10 45.69 wind 3.0 30 < th dose dependent rect. 2 1
12 45.71 temperature 20.0 30 > th dose independent rect. 2 1
13 45.72 atmosphere 1000.0 30 > th dose independent rect. 2 1
18 45.74 wind 5.0 30 < th dose independent rect. 2 1
22 45.75 wind 9.0 1440 < th dose independent rect. 23 1
23 45.75 temperature 10.0 30 > th dose independent rect. 2 1
25 45.75 temperature 10.0 1440 > th dose independent rect. 23 1
28 45.75 temperature 25.0 30 < th dose independent rect. 2 1
30 45.75 temperature 30.0 1440 < th dose independent rect. 23 1
34 45.75 humidity 50.0 30 > th dose independent rect. 2 1
37 45.75 humidity 50.0 1440 > th dose independent rect. 23 1
48 45.75 atmosphere 995.0 1440 > th dose independent rect. 23 1
49 45.75 atmosphere 1010.0 30 < th dose independent rect. 2 1
51 45.75 radiation 1.0 30 < th dose independent rect. 2 1
56 45.75 radiation 1.0 1440 < th dose independent rect. 23 1
76 45.75 precipitation 0.1 30 < th dose independent rect. 2 1
77 45.75 temperature 10.0 30 > th dose independent rect. 3 23
78 45.75 temperature 10.0 1440 > th dose independent rect. 24 23
83 45.75 radiation 1.0 30 < th dose dependent rect. 2 1
93 45.75 precipitation 0.1 30 < th dose dependent rect. 2 1
94 45.76 temperature 25.0 30 > th dose independent rect. 22 1
96 45.76 humidity 50.0 30 > th dose dependent rect. 2 1
98 45.76 atmosphere 1005.0 30 > th dose dependent rect. 22 1
99 45.77 temperature 20.0 30 > th dose dependent rect. 22 1
104 45.80 humidity 80.0 30 > th dose independent rect. 22 1
108 45.82 wind 1.0 30 > th dose independent rect. 22 1
109 45.82 wind 3.0 30 < th dose independent rect. 22 1
110 45.82 atmosphere 1005.0 30 > th dose independent rect. 22 1
111 45.83 humidity 90.0 30 < th dose independent rect. 22 1
117 45.84 temperature 10.0 30 > th dose independent rect. 22 1
119 45.84 temperature 30.0 30 < th dose independent rect. 22 1
120 45.84 humidity 50.0 30 > th dose independent rect. 22 1
123 45.84 atmosphere 995.0 30 > th dose independent rect. 22 1
124 45.84 atmosphere 1010.0 30 < th dose independent rect. 22 1
126 45.84 radiation 1.0 30 < th dose independent rect. 22 1
131 45.84 temperature 10.0 30 > th dose independent rect. 23 23
132 45.84 wind 7.0 30 < th dose dependent rect. 22 1
134 45.84 radiation 1.0 30 < th dose dependent rect. 22 1
143 45.86 precipitation 0.1 30 < th dose independent rect. 22 1
144 45.86 humidity 50.0 30 > th dose dependent rect. 22 1
146 45.86 precipitation 0.1 30 < th dose dependent rect. 22 1
149 45.94 atmosphere 1015.0 30 < th dose dependent rect. 2 1
150 45.98 atmosphere 1015.0 30 < th dose dependent rect. 22 1
152 45.99 humidity 90.0 30 < th dose dependent rect. 22 1
154 46.02 wind 1.0 30 > th dose dependent rect. 22 1
156 46.05 temperature 30.0 30 < th dose dependent rect. 2 1
162 46.17 temperature 30.0 30 < th dose dependent rect. 22 1
170 46.28 wind 1.0 30 > th dose independent rect. 2 1
253 46.74 wind 9.0 30 < th dose independent rect. 23 23
256 46.84 wind 9.0 30 < th dose independent rect. 3 23
260 46.99 radiation 1.0 14400 < th dose dependent rect. 3 1
262 47.09 wind 1.0 270 < th dose independent rect. 2 1
272 47.23 wind 9.0 1440 < th dose independent rect. 3 1
273 47.23 temperature 10.0 1440 > th dose independent rect. 3 1
276 47.23 temperature 30.0 1440 < th dose independent rect. 3 1
280 47.23 humidity 50.0 1440 > th dose independent rect. 3 1
289 47.23 atmosphere 995.0 1440 > th dose independent rect. 3 1
290 47.23 radiation 1.0 1440 < th dose independent rect. 3 1
310 47.23 temperature 10.0 1440 > th dose independent rect. 4 23
323 47.24 wind 1.0 270 < th dose dependent rect. 2 1
330 47.50 atmosphere 995.0 30 > th dose independent rect. 23 23
333 47.60 temperature 20.0 30 > th dose dependent rect. 22 8
338 47.66 temperature 25.0 90 > th dose independent rect. 21 6
339 47.66 atmosphere 995.0 30 > th dose independent rect. 3 23
342 47.70 temperature 25.0 270 > th dose independent rect. 19 8
352 47.76 precipitation 0.1 30 < th dose independent rect. 23 23
355 47.76 precipitation 0.1 30 < th dose dependent rect. 23 23
367 47.87 temperature 20.0 30 > th dose dependent rect. 22 5
369 47.89 temperature 25.0 270 > th dose dependent rect. 21 6
377 47.96 wind 1.0 30 > th dose independent rect. 23 23
396 48.04 precipitation 0.1 30 < th dose independent rect. 3 23
398 48.04 precipitation 0.1 30 < th dose dependent rect. 3 23
399 48.05 temperature 25.0 720 > th dose independent rect. 18 5
406 48.07 humidity 80.0 1440 > th dose dependent rect. 12 1
408 48.08 humidity 80.0 1440 > th dose independent rect. 12 1
409 48.09 temperature 25.0 720 > th dose independent rect. 18 1
426 48.13 temperature 25.0 270 > th dose dependent rect. 21 11
427 48.14 temperature 25.0 270 > th dose independent rect. 19 13
447 48.20 radiation 1.0 30 > th dose independent rect. 5 1
477 48.25 wind 5.0 4320 > th dose dependent rect. 6 2
487 48.29 humidity 80.0 1440 < th dose independent rect. 12 1
490 48.29 temperature 20.0 30 > th dose dependent rect. 5 1
495 48.31 wind 5.0 4320 < th dose independent rect. 6 1
496 48.31 temperature 30.0 30 < th dose independent rect. 23 23
503 48.33 wind 5.0 4320 > th dose independent rect. 5 2
518 48.36 wind 5.0 4320 < th dose independent rect. 4 4
537 48.39 humidity 50.0 10 > th dose independent rect. 23 23
541 48.40 temperature 25.0 270 > th dose independent sin 11 NA
544 48.40 temperature 30.0 30 < th dose independent rect. 3 23
546 48.40 wind 1.0 270 < th dose dependent rect. 9 19
547 48.41 wind 9.0 4320 < th dose independent rect. 7 1
578 48.47 wind 5.0 4320 < th dose independent rect. 1 9
586 48.48 wind 5.0 4320 > th dose independent rect. 2 8
593 48.49 humidity 60.0 90 > th dose independent rect. 23 13
596 48.50 humidity 60.0 30 > th dose independent rect. 11 1
607 48.51 wind 1.0 4320 > th dose independent rect. 15 1
627 48.52 temperature 10.0 720 > th dose independent rect. 15 8
631 48.52 temperature 10.0 720 > th dose independent rect. 23 16
635 48.53 wind 9.0 4320 < th dose independent rect. 24 9
646 48.54 temperature 20.0 720 < th dose dependent rect. 7 1
652 48.55 humidity 60.0 90 > th dose independent rect. 21 15
660 48.56 temperature 10.0 720 > th dose independent rect. 3 8
661 48.56 atmosphere 995.0 720 > th dose independent rect. 3 8
663 48.56 temperature 10.0 720 > th dose independent rect. 11 16
664 48.56 humidity 50.0 10 > th dose independent rect. 3 23
671 48.57 temperature 25.0 90 < th dose independent rect. 10 1
677 48.57 temperature 20.0 30 > th dose dependent rect. 22 11
678 48.58 wind 9.0 10 < th dose independent sin 7 NA
679 48.58 temperature 25.0 270 < th dose independent sin 12 NA
682 48.58 temperature 30.0 10 < th dose independent rect. 11 1
683 48.58 humidity 90.0 4320 < th dose independent rect. 10 1
684 48.58 temperature 10.0 720 > th dose independent rect. 11 8
685 48.58 atmosphere 1015.0 720 < th dose independent rect. 11 8
688 48.58 temperature 10.0 720 > th dose independent rect. 19 16
689 48.58 atmosphere 995.0 720 > th dose independent rect. 19 16
695 48.59 temperature 25.0 270 < th dose independent rect. 19 14
696 48.59 atmosphere 995.0 720 > th dose independent rect. 23 16
697 48.59 humidity 60.0 30 > th dose independent rect. 6 20
701 48.60 precipitation 0.1 1440 < th dose independent rect. 23 1
704 48.60 temperature 30.0 10 < th dose independent rect. 8 8
705 48.60 atmosphere 995.0 720 > th dose independent rect. 15 8
710 48.60 temperature 30.0 10 < th dose independent rect. 22 14
711 48.60 atmosphere 995.0 720 > th dose independent rect. 11 16
713 48.60 precipitation 0.1 1440 < th dose dependent rect. 23 1
726 48.62 radiation 30.0 90 > th dose independent rect. 10 1
735 48.62 wind 5.0 4320 > th dose dependent rect. 4 6
740 48.63 wind 9.0 720 < th dose independent rect. 3 8
744 48.63 humidity 60.0 30 > th dose independent rect. 11 15
751 48.64 radiation 20.0 10 < th dose independent rect. 12 1
754 48.64 wind 9.0 4320 < th dose independent rect. 3 4
766 48.65 precipitation 0.1 4320 > th dose independent rect. 8 4
767 48.65 temperature 25.0 720 < th dose independent rect. 18 5
768 48.65 temperature 10.0 720 > th dose independent rect. 23 8
769 48.65 temperature 30.0 720 < th dose independent rect. 23 8
770 48.65 humidity 50.0 720 > th dose independent rect. 23 8
772 48.65 atmosphere 995.0 720 > th dose independent rect. 23 8
773 48.65 radiation 40.0 720 < th dose independent rect. 23 8
776 48.65 temperature 10.0 720 > th dose independent rect. 7 16
780 48.65 precipitation 0.1 4320 > th dose dependent rect. 8 4
801 48.66 temperature 30.0 10 < th dose independent rect. 8 4
803 48.66 wind 9.0 720 < th dose independent rect. 23 8
804 48.66 humidity 50.0 720 > th dose independent rect. 3 8
808 48.66 temperature 30.0 270 < th dose dependent rect. 8 1
816 48.66 wind 3.0 1440 < th dose dependent rect. 16 4
819 48.66 wind 5.0 4320 > th dose dependent rect. 21 14
828 48.67 temperature 25.0 10 < th dose independent rect. 2 5
837 48.67 humidity 60.0 270 > th dose dependent rect. 8 1
838 48.67 humidity 90.0 1440 > th dose dependent rect. 18 1
841 48.67 wind 5.0 4320 > th dose dependent rect. 2 9
849 48.68 humidity 60.0 30 > th dose independent rect. 6 7
855 48.68 temperature 25.0 720 > th dose dependent rect. 18 1
860 48.69 wind 9.0 10 > th dose independent sin 6 NA
868 48.69 precipitation 0.1 720 < th dose independent rect. 11 8
869 48.69 temperature 25.0 270 < th dose independent rect. 17 9
881 48.69 precipitation 0.1 720 < th dose dependent rect. 11 8
884 48.70 wind 9.0 10 > th dose independent rect. 10 2
902 48.70 atmosphere 995.0 720 > th dose independent rect. 11 8
921 48.71 temperature 25.0 720 < th dose independent rect. 19 2
931 48.71 wind 3.0 1440 < th dose dependent rect. 15 8
938 48.72 wind 1.0 4320 < th dose independent rect. 15 1
939 48.72 humidity 70.0 270 > th dose independent rect. 8 1
946 48.72 wind 5.0 4320 > th dose independent rect. 21 13
953 48.72 wind 3.0 30 < th dose dependent rect. 2 4
958 48.73 radiation 40.0 1440 < th dose independent rect. 7 1
961 48.73 wind 1.0 1440 > th dose independent rect. 15 6
962 48.73 wind 1.0 1440 > th dose independent rect. 15 8
971 48.73 humidity 50.0 720 > th dose independent rect. 19 16
981 48.73 wind 1.0 270 < th dose dependent rect. 15 13
990 48.74 wind 7.0 4320 < th dose independent rect. 21 14
995 48.74 wind 5.0 4320 > th dose dependent sin 8 NA