Os04g0624900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0624900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.26 | 0.585 | 4.84 | -0.395 | 0.728 | -2.73 | 0.155 | 0.675 | -0.178 | 1.92 | 31.25 | 221 | -- | -- |
| 155.6 | 0.581 | 4.82 | -0.281 | 0.743 | -2.72 | 0.298 | -- | -0.154 | 1.9 | 31.04 | 213 | -- | -- |
| 155.34 | 0.58 | 4.84 | -0.42 | 0.726 | -2.72 | -- | 0.804 | -0.184 | 1.89 | 31.25 | 219 | -- | -- |
| 155.94 | 0.582 | 4.83 | -0.287 | 0.739 | -2.7 | -- | -- | -0.155 | 1.85 | 30.96 | 213 | -- | -- |
| 159.08 | 0.587 | 4.82 | -0.468 | -- | -2.53 | -- | 0.977 | -0.109 | -- | 35.22 | 776 | -- | -- |
| 247.95 | 0.738 | 4.72 | 0.37 | 0.464 | -- | -0.0302 | -- | 0.335 | 20.1 | -- | -- | -- | -- |
| 247.95 | 0.737 | 4.72 | 0.37 | 0.464 | -- | -- | -- | 0.334 | 20.1 | -- | -- | -- | -- |
| 159.86 | 0.589 | 4.8 | -0.289 | -- | -2.51 | -- | -- | -0.068 | -- | 33.7 | 777 | -- | -- |
| 157.86 | 0.585 | 4.81 | -- | 0.704 | -2.58 | -- | -- | -0.102 | 1.71 | 31.04 | 211 | -- | -- |
| 259.79 | 0.753 | 4.71 | 0.366 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 251.57 | 0.742 | 4.73 | -- | 0.462 | -- | -- | -- | 0.293 | 20.2 | -- | -- | -- | -- |
| 161.8 | 0.592 | 4.79 | -- | -- | -2.4 | -- | -- | -0.0166 | -- | 33.9 | 759 | -- | -- |
| 263.33 | 0.757 | 4.72 | -- | -- | -- | -- | -- | 0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.27 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 3 | 151.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 6 | 151.82 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 15 | 153.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 16 | 153.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 25 | 154.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 33 | 155.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 75 | 156.56 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 76 | 156.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 77 | 156.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 98 | 156.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 13 |
| 100 | 156.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 11 |
| 102 | 156.98 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 157 | 157.60 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 182 | 157.91 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 251 | 158.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 335 | 159.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 363 | 159.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 388 | 159.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 410 | 159.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 493 | 160.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 497 | 160.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 616 | 160.44 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 652 | 160.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 692 | 160.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 940 | 161.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 994 | 161.31 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |